RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 BCL2L15Q5TBC7 163 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 FAM205BPQ63HN1 556 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 ANKRD54Q6NXT1 300 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 KRT74Q7RTS7 529 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 OVCH1Q7RTY7 1134 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 C9orf62Q8N4C0 152 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 C17orf47Q8NEP4 570 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 OR2T27Q8NH04 317 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 OR51A7Q8NH64 312 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 ADAMTS14Q8WXS8 1223 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 OR1E3Q8WZA6 343 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 ZFYVE21Q9BQ24 234 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 ZNF426Q9BUY5 554 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 ACTR6Q9GZN1 396 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 FBXO34Q9NWN3 711 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 B3GNT2Q9NY97 397 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 MAT2BQ9NZL9 334 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 CAMK2AQ9UQM7 478 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 RNF215Q9Y6U7 377 aa10.43□□□□□ -0.74
USP4-205ENST00000431357 TRAV27A0A087WT01 109 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 NPIPA5A0A0B4J1W7 369 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 LRRN3E7EW58 273 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 NPIPA7E9PJI5 369 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 TRIM77I1YAP6 450 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 FABP7O15540 132 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 FLRT2O43155 660 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 NDUFA2O43678 99 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 GSTZ1O43708 216 aaPredicted RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 FGF17O60258 216 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 APBB3O95704 486 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 NPIPA8P0DM63 369 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 ACVR1BP36896 505 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 OR3A3P47888 321 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 SNRPNP63162 240 aaKnown RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 S100A12P80511 92 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 ID2Q02363 134 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 LGALS3BPQ08380 585 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 MGAT2Q10469 447 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 SLC25A35Q3KQZ1 300 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 SLC22A10Q63ZE4 541 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 FIGNL1Q6PIW4 674 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 LUZP2Q86TE4 346 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 OR5J2Q8NH18 312 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 HOXB13Q92826 284 aaPredicted RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 YIPF5Q969M3 257 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 PHF21AQ96BD5 680 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 SMIM19Q96E16 107 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 MAP6Q96JE9 813 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 WDR92Q96MX6 357 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 TNFRSF13CQ96RJ3 184 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 LRRN3Q9H3W5 708 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 DCAF16Q9NXF7 216 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 ACTR10Q9NZ32 417 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 SNRNP200O75643 2136 aaKnown RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 TEX13CA0A0J9YWL9 993 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 A0A1B0GTQ1 180 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 A0A1B0GWA3 101 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 NARSO43776 548 aaKnown RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 LDB3O75112 727 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 DNAJB6O75190 326 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 ITGA10O75578 1167 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 ANXA3P12429 323 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 AK4P27144 223 aaPredicted RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 ACTR1BP42025 376 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 KIR2DL1P43626 348 aaPredicted RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 ACTR1AP61163 376 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 SNRPD2P62316 118 aaKnown RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 DYRK1AQ13627 763 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 COL9A2Q14055 689 aaPredicted RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 GGTLC2Q14390 218 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 CDK5R1Q15078 307 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 RPL22L1Q6P5R6 122 aaKnown RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 LYPD4Q6UWN0 246 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 CMIPQ8IY22 773 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 HAVCR2Q8TDQ0 301 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 GRHL3Q8TE85 626 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 ZNF431Q8TF32 576 aaPredicted RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 THAP4Q8WY91 577 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 CTHRC1Q96CG8 243 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 GPR137Q96N19 417 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 PLA2G2FQ9BZM2 168 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 OR51J1Q9H342 316 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.42□□□□□ -0.74
USP4-205ENST00000431357 NUDT15Q9NV35 164 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 DZANK1Q9NVP4 752 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 EMC3Q9P0I2 261 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 SPATA2Q9UM82 520 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 SCML1Q9UN30 329 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 ENTPD2Q9Y5L3 495 aa10.42□□□□□ -0.74
USP4-205ENST00000431357 MYO7AQ13402 2215 aa10.41□□□□□ -0.74
USP4-205ENST00000431357 A0A1B0GVI7 797 aa10.41□□□□□ -0.74
USP4-205ENST00000431357 GXYLT2A0PJZ3 443 aa10.41□□□□□ -0.74
USP4-205ENST00000431357 H0YGG7 62 aa10.41□□□□□ -0.74
USP4-205ENST00000431357 SMLR1H3BR10 107 aa10.41□□□□□ -0.74
USP4-205ENST00000431357 CYR61O00622 381 aa10.41□□□□□ -0.74
USP4-205ENST00000431357 YKT6O15498 198 aa10.41□□□□□ -0.74
USP4-205ENST00000431357 SULT1B1O43704 296 aa10.41□□□□□ -0.74
USP4-205ENST00000431357 GPRIN2O60269 458 aa10.41□□□□□ -0.74
USP4-205ENST00000431357 NOS1APO75052 506 aaPredicted RBP10.41□□□□□ -0.74
USP4-205ENST00000431357 NDUFB2O95178 105 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms