RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 KDM4EB2RXH2 506 aaPredicted RBP13.85□□□□□ -0.19
ACTB-204ENST00000425660 PRODHO43272 600 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 SCO2O43819 266 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 FADS2O95864 444 aaKnown RBP13.85□□□□□ -0.19
ACTB-204ENST00000425660 STSP08842 583 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 GRK5P34947 590 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 NBL1P41271 181 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 MAP2K4P45985 399 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 RPS4XP62701 263 aaKnown RBP13.85□□□□□ -0.19
ACTB-204ENST00000425660 EGR4Q05215 589 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 ZNF91Q05481 1191 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 C17orf67Q0P5P2 114 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 NTRK2Q16620 822 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 THSD4Q6ZMP0 1018 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 RTL4Q6ZR62 310 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 SLC46A3Q7Z3Q1 461 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 BCDIN3DQ7Z5W3 292 aaKnown RBP13.85□□□□□ -0.19
ACTB-204ENST00000425660 CLVS1Q8IUQ0 354 aaPredicted RBP13.85□□□□□ -0.19
ACTB-204ENST00000425660 STX19Q8N4C7 294 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 DUSP19Q8WTR2 217 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 ISOC1Q96CN7 298 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 SGTBQ96EQ0 304 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 MCCC2Q9HCC0 563 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 FOXJ2Q9P0K8 574 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 TRAV27A0A087WT01 109 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 SNTNA6NMZ2 147 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 GNB5O14775 395 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 TACR3P29371 465 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 SUMO3P55854 103 aaPredicted RBP13.85□□□□□ -0.19
ACTB-204ENST00000425660 SSPNQ14714 243 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 TOMM34Q15785 309 aaPredicted RBP13.85□□□□□ -0.19
ACTB-204ENST00000425660 TMEM44Q2T9K0 475 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 AADACL4Q5VUY2 407 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 RNLSQ5VYX0 342 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 PPP1R32Q7Z5V6 425 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 CYP4Z2PQ8N1L4 340 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 ESX1Q8N693 406 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 OR51A7Q8NH64 312 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 B4GALNT2Q8NHY0 566 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 GPR119Q8TDV5 335 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 SPACA9Q96E40 222 aaPredicted RBP13.85□□□□□ -0.19
ACTB-204ENST00000425660 FN3KQ9H479 309 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 BAIAP2Q9UQB8 552 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 GPR52Q9Y2T5 361 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 EXPH5Q8NEV8 1989 aa13.85□□□□□ -0.19
ACTB-204ENST00000425660 RIF1Q5UIP0 2472 aaKnown RBP13.84□□□□□ -0.19
ACTB-204ENST00000425660 PCNX2A6NKB5 2137 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 IGLV3-32A0A0A0MS00 114 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 NSG1A0A0A6YYJ2 146 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 CH25HO95992 272 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 ITPKBP27987 946 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 TMBIM6P55061 237 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 DLX5P56178 289 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 ZNF791Q3KP31 576 aaPredicted RBP13.84□□□□□ -0.19
ACTB-204ENST00000425660 CACTIN-AS1Q8N1I8 211 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 ANKK1Q8NFD2 765 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 OR5M3Q8NGP4 307 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 C9orf43Q8TAL5 461 aaPredicted RBP13.84□□□□□ -0.19
ACTB-204ENST00000425660 TNFRSF13CQ96RJ3 184 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 YIPF3Q9GZM5 350 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 CMC2Q9NRP2 79 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 OSGIN1Q9UJX0 560 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 FARSAQ9Y285 508 aaKnown RBP13.84□□□□□ -0.19
ACTB-204ENST00000425660 ZNF337Q9Y3M9 751 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 PCDHGB6Q9Y5F9 930 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 COMMD3-BMI1R4GMX3 469 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 FREM2Q5SZK8 3169 aa13.84□□□□□ -0.19
ACTB-204ENST00000425660 TRIM64BA6NI03 449 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 B4DXG7 233 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 C21orf140B9A014 251 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 TERTO14746 1132 aaKnown RBP13.83□□□□□ -0.2
ACTB-204ENST00000425660 ITGA10O75578 1167 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 OR7A10O76100 309 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 ADRA2AP08913 450 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 GSTT1P30711 240 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 ZNF74Q16587 644 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 COL28A1Q2UY09 1125 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 C3orf38Q5JPI3 329 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 GPR107Q5VW38 600 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 NXNL2Q5VZ03 156 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 TMEM81Q6P7N7 255 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 RFKQ969G6 155 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 PLEKHA8Q96JA3 519 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 GPR87Q9BY21 358 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 CXorf56Q9H5V9 222 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 PTTG2Q9NZH5 202 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.83□□□□□ -0.22e-27■□□□□ 8.5
ACTB-204ENST00000425660 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.83□□□□□ -0.2
ACTB-204ENST00000425660 ANKUB1A6NFN9 424 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 ETV2O00321 342 aaPredicted RBP13.83□□□□□ -0.2
ACTB-204ENST00000425660 NDUFB2O95178 105 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 CELA2AP08217 269 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 PEPDP12955 493 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 ICAM2P13598 275 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 SLC6A6P31641 620 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 PTGDSP41222 190 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 RPS18P62269 152 aaKnown RBP13.83□□□□□ -0.2
ACTB-204ENST00000425660 RPS15P62841 145 aaKnown RBP13.83□□□□□ -0.2
ACTB-204ENST00000425660 FOXK2Q01167 660 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 QPRTQ15274 297 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms