RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 C3orf49Q96BT1 292 aa16.55■□□□□ 0.24
HDAC6-205ENST00000423941 NSL1Q96IY1 281 aa16.55■□□□□ 0.24
HDAC6-205ENST00000423941 ALG2Q9H553 416 aa16.55■□□□□ 0.24
HDAC6-205ENST00000423941 SPAG4Q9NPE6 437 aa16.55■□□□□ 0.24
HDAC6-205ENST00000423941 TMED7Q9Y3B3 224 aa16.55■□□□□ 0.24
HDAC6-205ENST00000423941 ADGRG4Q8IZF6 3080 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 MPDZO75970 2070 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 SLC22A20A6NK97 555 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 CXCL13O43927 109 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 FMO6PO60774 539 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 AQP8O94778 261 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 OPN1SWP03999 348 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 CRHP06850 196 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 FESP07332 822 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 CTSSP25774 331 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 HTR2AP28223 471 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 EIF1AXP47813 144 aaKnown RBP16.54■□□□□ 0.24
HDAC6-205ENST00000423941 MNAT1P51948 309 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 RAC3P60763 192 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 HOXC5Q00444 222 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 TFF3Q07654 80 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 TMPPEQ6ZT21 453 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 MAMDC2Q7Z304 686 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-205ENST00000423941 ATG4DQ86TL0 474 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-205ENST00000423941 FNDC9Q8TBE3 224 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 ARL5BQ96KC2 179 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 PCDHAC1Q9H158 963 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 C12orf10Q9HB07 376 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 KLHL28Q9NXS3 571 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 TESQ9UGI8 421 aaKnown RBP16.54■□□□□ 0.24
HDAC6-205ENST00000423941 CD300AQ9UGN4 299 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 TRAPPC4Q9Y296 219 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 HDGFL3Q9Y3E1 203 aa16.54■□□□□ 0.24
HDAC6-205ENST00000423941 PTPN13Q12923 2485 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 TMEM72A0PK05 275 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 NPIPB7O75200 414 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 HTR1EP28566 365 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 COPZ1P61923 177 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 FOXF2Q12947 444 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 SGCBQ16585 318 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 OR2A2Q6IF42 318 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 ACBD4Q8NC06 268 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 OR4D11Q8NGI4 311 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 CA5BP1Q8WTZ4 195 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 CPNE4Q96A23 557 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-205ENST00000423941 ZNF559Q9BR84 538 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 SRXN1Q9BYN0 137 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 POTEKPQ9BYX7 375 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 TRIM2Q9C040 744 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 JKAMPQ9P055 326 aa16.53■□□□□ 0.24
HDAC6-205ENST00000423941 SPIN1Q9Y657 262 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-205ENST00000423941 SPTAN1Q13813 2472 aaKnown RBP16.53■□□□□ 0.24
HDAC6-205ENST00000423941 ASH1LQ9NR48 2969 aaKnown RBP16.53■□□□□ 0.24
HDAC6-205ENST00000423941 A0A1W2PNR3 127 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 TNFSF13O75888 250 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 PMS2P2O95744 297 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 IFNA14P01570 189 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 TMIGD3P0DMS9 266 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-205ENST00000423941 HSD17B1P14061 328 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 AGFG1P52594 562 aaKnown RBP16.52■□□□□ 0.24
HDAC6-205ENST00000423941 SELENOWP63302 87 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 SLC25A3Q00325 362 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 NPTX1Q15818 432 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 ZNF239Q16600 458 aaKnown RBP16.52■□□□□ 0.24
HDAC6-205ENST00000423941 SLC25A35Q3KQZ1 300 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 SPATS1Q496A3 300 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 EEF1A1P5Q5VTE0 462 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 TRPM8Q7Z2W7 1104 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 CADM2Q8N3J6 435 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 RELL2Q8NC24 303 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-205ENST00000423941 ATP6V1C2Q8NEY4 427 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 OR6T1Q8NGN1 323 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 DNAJA4Q8WW22 397 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-205ENST00000423941 SLC38A4Q969I6 547 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 OR5B2Q96R09 309 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 PRR14Q9BWN1 585 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 TIGARQ9NQ88 270 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 NDE1Q9NXR1 346 aa16.52■□□□□ 0.24
HDAC6-205ENST00000423941 PLEKHB1Q9UF11 243 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-205ENST00000423941 A0A1B0GWA3 101 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 DNPH1O43598 174 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 FZD7O75084 574 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 FCGR2AP12318 317 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 CALB2P22676 271 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 SLC7A1P30825 629 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 OPRM1P35372 400 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 KIR2DL2P43627 348 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-205ENST00000423941 DIO1P49895 249 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 RGS8P57771 180 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-205ENST00000423941 H3F3AP84243 136 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 MYBPHQ13203 477 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 FBXL19-AS1Q494R0 122 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 CYBRD1Q53TN4 286 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 LINC00114Q6XXX2 140 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 OR52E4Q8NGH9 312 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 SLC26A7Q8TE54 656 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 RNF128Q8TEB7 428 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 INTS12Q96CB8 462 aaKnown RBP16.51■□□□□ 0.23
HDAC6-205ENST00000423941 SFXN3Q9BWM7 321 aa16.51■□□□□ 0.23
HDAC6-205ENST00000423941 UCK2Q9BZX2 261 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms