RNA–Protein interactions for RNA: ENST00000423479.7

CTCFL-205, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-205ENST00000423479 NUP43Q8NFH3 380 aa13.12□□□□□ -0.31
CTCFL-205ENST00000423479 VN1R2Q8NFZ6 395 aa13.12□□□□□ -0.31
CTCFL-205ENST00000423479 ZDHHC1Q8WTX9 485 aa13.12□□□□□ -0.31
CTCFL-205ENST00000423479 SMIM19Q96E16 107 aa13.12□□□□□ -0.31
CTCFL-205ENST00000423479 OR14A2Q96R54 314 aa13.12□□□□□ -0.31
CTCFL-205ENST00000423479 GINS4Q9BRT9 223 aa13.12□□□□□ -0.31
CTCFL-205ENST00000423479 SLC6A20Q9NP91 592 aa13.12□□□□□ -0.31
CTCFL-205ENST00000423479 NRIP3Q9NQ35 241 aa13.12□□□□□ -0.31
CTCFL-205ENST00000423479 ANKRD20A5PA0PJZ0 165 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 TSPAN11A1L157 253 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 NEDD8-MDP1E9PL57 170 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 K7ESM1 405 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 LEFTY2O00292 366 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 EMC8O43402 210 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 SIX6O95475 246 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 CBX7O95931 251 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 HPP00738 406 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 NOS3P29474 1203 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 DEFA5Q01523 94 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 DUSP2Q05923 314 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 SLC9A5Q14940 896 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 UBXN2BQ14CS0 331 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 TP53I3Q53FA7 332 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 ZNF660Q6AZW8 331 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 ZNF793Q6ZN11 406 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 NUDT18Q6ZVK8 323 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 GAREM2Q75VX8 874 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 SSX6Q7RTT6 188 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 TMEM25Q86YD3 366 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 MCATQ8IVS2 390 aaKnown RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 SERPINA12Q8IW75 414 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 DCUN1D3Q8IWE4 304 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 CNRIP1Q96F85 164 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 LRRC46Q96FV0 321 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 UTP23Q9BRU9 249 aaKnown RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 TTTY10Q9BZA0 68 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 COL4A3Q01955 1670 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 UBE2QL1A1L167 161 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 ZNF98A6NK75 572 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 NRG2O14511 850 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 PTP4A3O75365 173 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 NDUFB6O95139 128 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 MAKP20794 623 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 MECP2P51608 486 aaKnown RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 PDX1P52945 283 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 OC90Q02509 493 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 COL9A2Q14055 689 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 HES5Q5TA89 166 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 FCRLBQ6BAA4 426 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 HEPHL1Q6MZM0 1159 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 OR52B4Q8NGK2 314 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 OR2L2Q8NH16 312 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 LINC00615Q96LM1 132 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 OR1F2PQ96R84 312 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 OR52A5Q9H2C5 316 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 EXOSC3Q9NQT5 275 aaKnown RBP13.11□□□□□ -0.31
CTCFL-205ENST00000423479 IL36AQ9UHA7 158 aa13.11□□□□□ -0.31
CTCFL-205ENST00000423479 A0A1B0GW55 424 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 RIIAD1A6NNX1 92 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 MPTX1A8MV57 137 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 OGG1O15527 345 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 LCMT2O60294 686 aaKnown RBP13.1□□□□□ -0.31
CTCFL-205ENST00000423479 AQP8O94778 261 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 RCBTB2O95199 551 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 ZIC2O95409 532 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-205ENST00000423479 SOD2P04179 222 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 DUX4L2P0CJ85 424 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 DUX4L3P0CJ86 424 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 DUX4L4P0CJ87 422 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 DUX4L5P0CJ88 424 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 DUX4L6P0CJ89 424 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 DUX4L7P0CJ90 424 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 LAG3P18627 525 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 MC3RP41968 323 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 H2BFSP57053 126 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 GMFBP60983 142 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 KRT33BQ14525 404 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 CDK5R1Q15078 307 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 FCRLAQ7L513 359 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 HDDC3Q8N4P3 179 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 OR5M1Q8NGP8 315 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 PFN4Q8NHR9 129 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 CXorf40AQ8TE69 158 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 TFGQ92734 400 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-205ENST00000423479 DTD2Q96FN9 168 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 PEX11GQ96HA9 241 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 ZNF514Q96K75 400 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-205ENST00000423479 DUX4Q9UBX2 424 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 ZNF443Q9Y2A4 671 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-205ENST00000423479 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 IRAK3Q9Y616 596 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 LAMA2P24043 3122 aaKnown RBP13.1□□□□□ -0.31
CTCFL-205ENST00000423479 ANKRD61A6NGH8 418 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 FAM74A7A6NL05 159 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 SULT1B1O43704 296 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 SPDEFO95238 335 aa13.1□□□□□ -0.31
CTCFL-205ENST00000423479 GYPBP06028 91 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms