RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 LNX2Q8N448 690 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 OR6C4Q8NGE1 309 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 OR13C5Q8NGS8 318 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 ZNF563Q8TA94 476 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 BRIX1Q8TDN6 353 aaKnown RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 THAP3Q8WTV1 239 aaPredicted RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 NXF5Q9H1B4 397 aaKnown RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 CUTCQ9NTM9 273 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 ZNF346Q9UL40 294 aaKnown RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 A0A075B6Q4 140 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 SERINC4A6NH21 518 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 MCIDASD6RGH6 385 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 OIP5O43482 229 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 IL1AP01583 271 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 APEX1P27695 318 aaKnown RBP10.06□□□□□ -0.8
DDX56-203ENST00000421223 GPR3P46089 330 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 FASLGP48023 281 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 TMED10P49755 219 aaKnown RBP10.06□□□□□ -0.8
DDX56-203ENST00000421223 IL18Q14116 193 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 GRM7Q14831 915 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 NSDHLQ15738 373 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 GARNL3Q5VVW2 1013 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 ULK3Q6PHR2 472 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 QSOX2Q6ZRP7 698 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.06□□□□□ -0.8
DDX56-203ENST00000421223 SYT9Q86SS6 491 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 RFLNBQ8N5W9 214 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 SMPDL3BQ92485 455 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 ZDHHC12Q96GR4 267 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 NMNAT3Q96T66 252 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 G6PC3Q9BUM1 346 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 MMP28Q9H239 520 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 MIXL1Q9H2W2 232 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 BABAM2Q9NXR7 383 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 ZMAT5Q9UDW3 170 aaKnown RBP10.06□□□□□ -0.8
DDX56-203ENST00000421223 TMEM5Q9Y2B1 443 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 SF3B6Q9Y3B4 125 aaKnown RBP10.06□□□□□ -0.8
DDX56-203ENST00000421223 ELOA3DA6NLF2 546 aaPredicted RBP10.06□□□□□ -0.8
DDX56-203ENST00000421223 IGLV3-19P01714 112 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 ENDOUP21128 410 aaKnown RBP10.06□□□□□ -0.8
DDX56-203ENST00000421223 SHC1P29353 583 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 SLC6A6P31641 620 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 MAP3K8P41279 467 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 CD226Q15762 336 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 ELOA3BQ3SY89 546 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 TMPRSS11FQ6ZWK6 438 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 ZNF550Q7Z398 422 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 ELOA3Q8NG57 546 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 OR5W2Q8NH69 310 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 RASD2Q96D21 266 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 SGTBQ96EQ0 304 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 CMC2Q9NRP2 79 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 MED17Q9NVC6 651 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 C14orf105Q9NVL8 296 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 MRPS18AQ9NVS2 196 aaKnown RBP10.06□□□□□ -0.8
DDX56-203ENST00000421223 SLC35A3Q9Y2D2 325 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 ZDBF2Q9HCK1 2354 aa10.06□□□□□ -0.8
DDX56-203ENST00000421223 IGHV3-20A0A0C4DH32 117 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 A0A1W2PR77 199 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 CPED1A4D0V7 1026 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 TLCD2A6NGC4 264 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 PTTG1O95997 202 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 IL7P13232 177 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 COL19A1Q14993 1142 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 ZNF79Q15937 498 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 TMEM44Q2T9K0 475 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 C14orf28Q4W4Y0 310 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 RNASE12Q5GAN4 147 aaKnown RBP10.05□□□□□ -0.8
DDX56-203ENST00000421223 PTCRAQ6ISU1 281 aaPredicted RBP10.05□□□□□ -0.8
DDX56-203ENST00000421223 TXNDC15Q96J42 360 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 TSSK2Q96PF2 358 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 KLHDC3Q9BQ90 382 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 MCCC2Q9HCC0 563 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 FSCN3Q9NQT6 498 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 V9GYH0 126 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 MN1Q10571 1320 aaPredicted RBP10.05□□□□□ -0.8
DDX56-203ENST00000421223 THADAQ6YHU6 1953 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 IFNGP01579 166 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 F13BP05160 661 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 PEPDP12955 493 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 PSMB10P40306 273 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 INPP1P49441 399 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 NR0B1P51843 470 aaKnown RBP10.05□□□□□ -0.8
DDX56-203ENST00000421223 HLA-DQA1Q5Y7H0 255 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 OR5M10Q6IEU7 315 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 ALKBH2Q6NS38 261 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 CNIH2Q6PI25 160 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 SSX6Q7RTT6 188 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 CEACAM19Q7Z692 300 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 LSM14AQ8ND56 463 aaKnown RBP10.05□□□□□ -0.8
DDX56-203ENST00000421223 NDC1Q9BTX1 674 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 LMF2Q9BU23 707 aaKnown RBP10.05□□□□□ -0.8
DDX56-203ENST00000421223 POU2F3Q9UKI9 436 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 MKL2Q9ULH7 1088 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 ATXN7L1Q9ULK2 861 aaPredicted RBP10.05□□□□□ -0.8
DDX56-203ENST00000421223 MRPS17Q9Y2R5 130 aaKnown RBP10.05□□□□□ -0.8
DDX56-203ENST00000421223 MPDZO75970 2070 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 WDFY4Q6ZS81 3184 aa10.05□□□□□ -0.8
DDX56-203ENST00000421223 SLC22A31A6NKX4 558 aa10.04□□□□□ -0.8
DDX56-203ENST00000421223 LMO7DNF2Z398 122 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms