RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CEP250Q9BV73 2442 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 FITM1A5D6W6 292 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 PRR23D1E9PI22 279 aaPredicted RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 H0YIG0 161 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 ICOSLGO75144 302 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 SNX4O95219 450 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 DDAH2O95865 285 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 PRR23D2P0DMB1 279 aaPredicted RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 PAICSP22234 425 aaKnown RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 SOX6P35712 828 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 RPL4P36578 427 aaKnown RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 NAA10P41227 235 aaPredicted RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 ERVK-25P63136 954 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 OXA1LQ15070 435 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 TIMM50Q3ZCQ8 353 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 MARCH3Q86UD3 253 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 PLXDC1Q8IUK5 500 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 C9orf40Q8IXQ3 194 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 MOSPD2Q8NHP6 518 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 PIGKQ92643 395 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 ATOH1Q92858 354 aaPredicted RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 RFKQ969G6 155 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 MOGAT1Q96PD6 335 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 NMNAT3Q96T66 252 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 VN1R1Q9GZP7 353 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 UCK1Q9HA47 277 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 ZNF304Q9HCX3 659 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 SLC22A11Q9NSA0 550 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 SEC14L4Q9UDX3 406 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 ZNF670-ZNF695F2Z2N8 137 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 UTS2O95399 124 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 HMGN1P05114 100 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 F13BP05160 661 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 OR12D2P58182 307 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 E2F1Q01094 437 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 ZNF141Q15928 474 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 KLHL26Q53HC5 615 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 ULK3Q6PHR2 472 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 SPATC1Q76KD6 591 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 MEPCEQ7L2J0 689 aaKnown RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 LYSMD2Q8IV50 215 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 RNF113BQ8IZP6 322 aaKnown RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 UBE2J2Q8N2K1 259 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 POC5Q8NA72 575 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 FAM98AQ8NCA5 519 aaKnown RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 OR13C5Q8NGS8 318 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 FAM174AQ8TBP5 190 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 ZNF721Q8TF20 911 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 NR4A3Q92570 626 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 CLDN23Q96B33 292 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 C3orf49Q96BT1 292 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 SDHCQ99643 169 aaPredicted RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 CTRCQ99895 268 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 SLX1AQ9BQ83 275 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 G6PC3Q9BUM1 346 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 ZNF426Q9BUY5 554 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 TEX12Q9BXU0 123 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 NXF2Q9GZY0 626 aaKnown RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 SMOC1Q9H4F8 434 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 APMAPQ9HDC9 416 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 TIGARQ9NQ88 270 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 MRPS18AQ9NVS2 196 aaKnown RBP8.06□□□□□ -1.12
SNCA-206ENST00000420646 MALT1Q9UDY8 824 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 EPHA6Q9UF33 1036 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 CFL2Q9Y281 166 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 SDK2Q58EX2 2172 aa8.06□□□□□ -1.12
SNCA-206ENST00000420646 IGKV1D-42A0A075B6H8 117 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 A0A087WV48 116 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 A0A1W2PQM1 296 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 TMEM129A0AVI4 362 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 SNTNA6NMZ2 147 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 H7C1C5 153 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 J3QLW9 94 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 GTPBP1O00178 669 aaKnown RBP8.05□□□□□ -1.12
SNCA-206ENST00000420646 ZNF354AO60765 605 aaPredicted RBP8.05□□□□□ -1.12
SNCA-206ENST00000420646 RCBTB2O95199 551 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 ZNF19P17023 458 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 ITPKBP27987 946 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 ACVR1BP36896 505 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 COPZ1P61923 177 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 LCN6P62502 163 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 ZNF322Q6U7Q0 402 aaPredicted RBP8.05□□□□□ -1.12
SNCA-206ENST00000420646 SYT9Q86SS6 491 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 LSMEM1Q8N8F7 131 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 UFD1Q92890 307 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 ALG8Q9BVK2 526 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 TRIM2Q9C040 744 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 SLC7A5P2Q9GIP4 190 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 ABCB9Q9NP78 766 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 KRCC1Q9NPI7 259 aaPredicted RBP8.05□□□□□ -1.12
SNCA-206ENST00000420646 CMC2Q9NRP2 79 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 ZNF229Q9UJW7 825 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 ZFHX4Q86UP3 3567 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 A0A1B0GVC2 190 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 DAPL1A0PJW8 107 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 A6NIN4 97 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 LOC110117498-PIK3R3F6TDL0 507 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 HCRTR2O43614 444 aa8.05□□□□□ -1.12
SNCA-206ENST00000420646 SIGLEC6O43699 453 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms