RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 CHRNEQ04844 493 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 FUT5Q11128 374 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 CAPRIN1Q14444 709 aaKnown RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 PDK3Q15120 406 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 TAB1Q15750 504 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 GPAT3Q53EU6 434 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 SYT14P1Q58G82 188 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 ADAM5Q6NVV9 412 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 ZNF621Q6ZSS3 439 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 BHLHA15Q7RTS1 189 aaPredicted RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 GALNT5Q7Z7M9 940 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 MTDHQ86UE4 582 aaKnown RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 CIARTQ8N365 385 aaPredicted RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 ARFGAP2Q8N6H7 521 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 TRIML2Q8N7C3 387 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 LILRB1Q8NHL6 650 aaPredicted RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 MAELQ96JY0 434 aaKnown RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 COX4I2Q96KJ9 171 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 PANX1Q96RD7 426 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 ZNF300Q96RE9 604 aaPredicted RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 CCDC106Q9BWC9 280 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 CXorf56Q9H5V9 222 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 ESRP2Q9H6T0 727 aaKnown RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 EXOSC3Q9NQT5 275 aaKnown RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 CTPS2Q9NRF8 586 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 ZNF701Q9NV72 531 aaPredicted RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 INTS9Q9NV88 658 aaKnown RBP8.36□□□□□ -1.07
NUP50-205ENST00000419387 AIG1Q9NVV5 245 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 FAM53CQ9NYF3 392 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 CHRNA9Q9UGM1 479 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 PRSS50Q9UI38 385 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 LIPT1Q9Y234 373 aa8.36□□□□□ -1.07
NUP50-205ENST00000419387 TRIM64A6NGJ6 449 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 TRIM64BA6NI03 449 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 CLDN24A6NM45 220 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 TRPC5OSA6NMA1 111 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 SMAD7O15105 426 aaKnown RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 HDAC3O15379 428 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 LYZL6O75951 148 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 CNOT4O95628 575 aaKnown RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 PMS2P2O95744 297 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 AVPP01185 164 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 C1QCP02747 245 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 PGRP06401 933 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 FESP07332 822 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 CD3EP07766 207 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 EDNRAP25101 427 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 EPHA3P29320 983 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 HTR3AP46098 478 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 IDH2P48735 452 aaKnown RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 CLK1P49759 484 aaKnown RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 ANXA11P50995 505 aaKnown RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 HPCAP84074 193 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 LRRC74AQ0VAA2 488 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 SYPL1Q16563 259 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 LRRC74BQ6ZQY2 392 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 GRINAQ7Z429 371 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 HMGN2P46Q86SG4 172 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 RNF130Q86XS8 419 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 ADGRG3Q86Y34 549 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 CMIPQ8IY22 773 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 ZNF100Q8IYN0 542 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 ANKFN1Q8N957 763 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 GLB1L3Q8NCI6 653 aaPredicted RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 PIWIL2Q8TC59 973 aaKnown RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 CNOT9Q92600 299 aaKnown RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 PMM1Q92871 262 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 ZHX1-C8orf76Q96EF9 292 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 ARL5BQ96KC2 179 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 MAGEB18Q96M61 343 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 C7orf26Q96N11 449 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 TRNT1Q96Q11 434 aaKnown RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 OR52E6Q96RD3 313 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 ZBTB18Q99592 522 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 INPP5KQ9BT40 448 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 POTEKPQ9BYX7 375 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 SLC38A1Q9H2H9 487 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 WDR55Q9H6Y2 383 aaPredicted RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 MTHFD2LQ9H903 347 aaPredicted RBP8.35□□□□□ -1.07
NUP50-205ENST00000419387 MED4Q9NPJ6 270 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 EMC3Q9P0I2 261 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 LAMP3Q9UQV4 416 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 HDGFL3Q9Y3E1 203 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 RNF115Q9Y4L5 304 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 GPR45Q9Y5Y3 372 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 FREM1Q5H8C1 2179 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 PRR14LQ5THK1 2151 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 ROS1P08922 2347 aa8.35□□□□□ -1.07
NUP50-205ENST00000419387 IGKV3D-15A0A087WSY6 115 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 GOLGA8QA0A0J9YX86 632 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 GOLGA8OA6NCC3 632 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 DPRXA6NFQ7 191 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 AGAP5A6NIR3 686 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 GOLGA8NF8WBI6 632 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 SLCO1B7G3V0H7 640 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 CLOCKO15516 846 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 DNPH1O43598 174 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 ADAM11O75078 769 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 KRT75O95678 551 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 GSNP06396 782 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms