RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ATP4BP51164 291 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 POLR2HP52434 150 aaKnown RBP14.64□□□□□ -0.07
LINC00404-201ENST00000418660 EPS8Q12929 822 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 FADDQ13158 208 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 RGNQ15493 299 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 ZSWIM7Q19AV6 140 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 LIN52Q52LA3 116 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 VRK2Q86Y07 508 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 GABRG1Q8N1C3 465 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 STON2Q8WXE9 905 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 SPDL1Q96EA4 605 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 ZHX1-C8orf76Q96EF9 292 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 TMEM19Q96HH6 336 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 ARL5BQ96KC2 179 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 ALPK1Q96QP1 1244 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 ACTR6Q9GZN1 396 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 CCDC167Q9P0B6 97 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 OSGIN1Q9UJX0 560 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 ZNF232Q9UNY5 417 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 TMED7Q9Y3B3 224 aa14.64□□□□□ -0.07
LINC00404-201ENST00000418660 HRNRQ86YZ3 2850 aaPredicted RBP14.63□□□□□ -0.07
LINC00404-201ENST00000418660 CDHR4A6H8M9 788 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 ZNF208O43345 1280 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 DNPH1O43598 174 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 GCM2O75603 506 aaPredicted RBP14.63□□□□□ -0.07
LINC00404-201ENST00000418660 THBS1P07996 1170 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 BMP2P12643 396 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 CCNA2P20248 432 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 TACR3P29371 465 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 OR3A2P47893 321 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 MAP2K6P52564 334 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 LARS2Q15031 903 aaKnown RBP14.63□□□□□ -0.07
LINC00404-201ENST00000418660 PDK3Q15120 406 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 DEFB113Q30KQ7 82 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 LRIF1Q5T3J3 769 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 RNF220Q5VTB9 566 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 ZNF836Q6ZNA1 936 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 CXorf67Q86X51 503 aaPredicted RBP14.63□□□□□ -0.07
LINC00404-201ENST00000418660 STEAP2Q8NFT2 490 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 OR11A1Q9GZK7 315 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 ADAM19Q9H013 955 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 BCL2L10Q9HD36 194 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 A4GALTQ9NPC4 353 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 SLC52A3Q9NQ40 469 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 RLIMQ9NVW2 624 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 TRAPPC4Q9Y296 219 aa14.63□□□□□ -0.07
LINC00404-201ENST00000418660 ZNF443Q9Y2A4 671 aaPredicted RBP14.63□□□□□ -0.07
LINC00404-201ENST00000418660 IGKV3D-15A0A087WSY6 115 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 NR5A2O00482 541 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 KLF4O43474 513 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 NUDT7P0C024 238 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 CD53P19397 219 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 LOXP28300 417 aaPredicted RBP14.62□□□□□ -0.07
LINC00404-201ENST00000418660 SQLEQ14534 574 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 P2RY6Q15077 328 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 AGKQ53H12 422 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 BEX5Q5H9J7 111 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 RPS26P11Q5JNZ5 115 aaPredicted RBP14.62□□□□□ -0.07
LINC00404-201ENST00000418660 SFRP5Q5T4F7 317 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 PRAMEF8Q5VWM4 474 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 PRAMEF7Q5VXH5 474 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 ABLIM2Q6H8Q1 611 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 DDIT4LQ96D03 193 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 ZNF300Q96RE9 604 aaPredicted RBP14.62□□□□□ -0.07
LINC00404-201ENST00000418660 SPATA9Q9BWV2 254 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 ARMC7Q9H6L4 198 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 CACYBPQ9HB71 228 aaKnown RBP14.62□□□□□ -0.07
LINC00404-201ENST00000418660 SLC25A37Q9NYZ2 338 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 SLAMF8Q9P0V8 285 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 TMEM181Q9P2C4 612 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 IFT52Q9Y366 437 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 GMEB1Q9Y692 573 aa14.62□□□□□ -0.07
LINC00404-201ENST00000418660 TMEM72A0PK05 275 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 ZNF814B7Z6K7 855 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 SASH3O75995 380 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 ADAP00813 363 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 GKN3PP0CG01 181 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 PPIBP23284 216 aaKnown RBP14.61□□□□□ -0.07
LINC00404-201ENST00000418660 ACAA2P42765 397 aaKnown RBP14.61□□□□□ -0.07
LINC00404-201ENST00000418660 OR2B6P58173 313 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 PAGE3Q5JUK9 113 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 Q6ZT83 130 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 GALNT5Q7Z7M9 940 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 MSRB3Q8IXL7 192 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 CLIP4Q8N3C7 705 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 PIGXQ8TBF5 258 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 S100PBPQ96BU1 408 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 ZNF775Q96BV0 537 aaPredicted RBP14.61□□□□□ -0.07
LINC00404-201ENST00000418660 HS3ST6Q96QI5 342 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 USB1Q9BQ65 265 aaKnown RBP14.61□□□□□ -0.07
LINC00404-201ENST00000418660 RABEP2Q9H5N1 569 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 BEX4Q9NWD9 120 aaPredicted RBP14.61□□□□□ -0.07
LINC00404-201ENST00000418660 EMC3Q9P0I2 261 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 PRSS50Q9UI38 385 aa14.61□□□□□ -0.07
LINC00404-201ENST00000418660 F8P00451 2351 aa14.6□□□□□ -0.07
LINC00404-201ENST00000418660 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.6□□□□□ -0.07
LINC00404-201ENST00000418660 A0A1W2PP18 115 aa14.6□□□□□ -0.07
LINC00404-201ENST00000418660 ZNF716A6NP11 495 aa14.6□□□□□ -0.07
LINC00404-201ENST00000418660 GPR171O14626 319 aa14.6□□□□□ -0.07
LINC00404-201ENST00000418660 EDF1O60869 148 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms