RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 NFKBIDQ8NI38 313 aa14.65□□□□□ -0.06
DDR1-231ENST00000417521 TMEM234Q8WY98 164 aa14.65□□□□□ -0.06
DDR1-231ENST00000417521 CPNE4Q96A23 557 aaPredicted RBP14.65□□□□□ -0.06
DDR1-231ENST00000417521 SH3GL1Q99961 368 aa14.65□□□□□ -0.06
DDR1-231ENST00000417521 HOPXQ9BPY8 73 aaPredicted RBP14.65□□□□□ -0.06
DDR1-231ENST00000417521 ECSITQ9BQ95 431 aa14.65□□□□□ -0.06
DDR1-231ENST00000417521 QRSL1Q9H0R6 528 aaKnown RBP14.65□□□□□ -0.06
DDR1-231ENST00000417521 OPN3Q9H1Y3 402 aaPredicted RBP14.65□□□□□ -0.06
DDR1-231ENST00000417521 SLC38A1Q9H2H9 487 aa14.65□□□□□ -0.06
DDR1-231ENST00000417521 CLEC4MQ9H2X3 399 aaPredicted RBP14.65□□□□□ -0.06
DDR1-231ENST00000417521 MTHFD2LQ9H903 347 aaPredicted RBP14.65□□□□□ -0.06
DDR1-231ENST00000417521 THUMPD1Q9NXG2 353 aaKnown RBP14.65□□□□□ -0.06
DDR1-231ENST00000417521 GMPR2Q9P2T1 348 aaKnown RBP14.65□□□□□ -0.06
DDR1-231ENST00000417521 USP22Q9UPT9 525 aa14.65□□□□□ -0.06
DDR1-231ENST00000417521 ARHGAP21Q5T5U3 1957 aa14.65□□□□□ -0.06
DDR1-231ENST00000417521 B2RBV5 119 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 ARAFP10398 606 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 SLC7A2P52569 658 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 CTBP2P56545 445 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 SESN3P58005 492 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 MXRA7P84157 204 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 NET1Q7Z628 596 aaPredicted RBP14.64□□□□□ -0.07
DDR1-231ENST00000417521 SERPINA11Q86U17 422 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 CMIPQ8IY22 773 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 ZNF610Q8N9Z0 462 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 REXO5Q96IC2 774 aaKnown RBP14.64□□□□□ -0.07
DDR1-231ENST00000417521 ZNF583Q96ND8 569 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 TMEM38AQ9H6F2 299 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 EXOSC3Q9NQT5 275 aaKnown RBP14.64□□□□□ -0.07
DDR1-231ENST00000417521 SERINC1Q9NRX5 453 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 ACER3Q9NUN7 267 aa14.64□□□□□ -0.07
DDR1-231ENST00000417521 SH3D21A4FU49 640 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 TMEM247A6NEH6 219 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 AGAP5A6NIR3 686 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 NME4O00746 187 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 CALB2P22676 271 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 MNAT1P51948 309 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 CRISP3P54108 245 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 CDK6Q00534 326 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 ZNF239Q16600 458 aaKnown RBP14.63□□□□□ -0.07
DDR1-231ENST00000417521 C3orf33Q6P1S2 294 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 RINLQ6ZS11 566 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 ARPINQ7Z6K5 226 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 CALHM3Q86XJ0 350 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 RNF128Q8TEB7 428 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 COQ10BQ9H8M1 238 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 GP6Q9HCN6 339 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 ITGB1BP2Q9UKP3 347 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 CLEC4AQ9UMR7 237 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 C5orf58C9J3I9 102 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 CASKO14936 926 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 POU2F1P14859 743 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 SLC7A1P30825 629 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 DNAJA1P31689 397 aaKnown RBP14.63□□□□□ -0.07
DDR1-231ENST00000417521 APOBEC1P41238 236 aaKnown RBP14.63□□□□□ -0.07
DDR1-231ENST00000417521 KCNJ5P48544 419 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 RAC3P60763 192 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 SCARB2Q14108 478 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 GNA13Q14344 377 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 RNPS1Q15287 305 aaKnown RBP14.63□□□□□ -0.07
DDR1-231ENST00000417521 C6orf89Q6UWU4 347 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 CDC20BQ86Y33 519 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 SLC43A2Q8N370 569 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 C11orf65Q8NCR3 313 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 RBM15BQ8NDT2 890 aaKnown RBP14.63□□□□□ -0.07
DDR1-231ENST00000417521 ATP6V1C2Q8NEY4 427 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 ROBO4Q8WZ75 1007 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 DOCK7Q96N67 2140 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 SRXN1Q9BYN0 137 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 CALML5Q9NZT1 146 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 EDARQ9UNE0 448 aa14.63□□□□□ -0.07
DDR1-231ENST00000417521 DSPPQ9NZW4 1301 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 AKAP9Q99996 3911 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 CLDN24A6NM45 220 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 C16orf97H3BN30 126 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 BCAS1O75363 584 aaPredicted RBP14.62□□□□□ -0.07
DDR1-231ENST00000417521 PGM3O95394 542 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 RPS4Y1P22090 263 aaKnown RBP14.62□□□□□ -0.07
DDR1-231ENST00000417521 FKBP2P26885 142 aaKnown RBP14.62□□□□□ -0.07
DDR1-231ENST00000417521 AQP1P29972 269 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 UGT2B10P36537 528 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 PLAURQ03405 335 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 LIPEQ05469 1076 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 MERTKQ12866 999 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 REEP3Q6NUK4 255 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 PLEKHM3Q6ZWE6 761 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 DEFB107AQ8IZN7 70 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 PGAM4Q8N0Y7 254 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 ZNF563Q8TA94 476 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 SLC25A43Q8WUT9 341 aaPredicted RBP14.62□□□□□ -0.07
DDR1-231ENST00000417521 NINJ1Q92982 152 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 BCL2L10Q9HD36 194 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 SPAG4Q9NPE6 437 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 FANCFQ9NPI8 374 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 ADA2Q9NZK5 511 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 TMEM181Q9P2C4 612 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 ABCD2Q9UBJ2 740 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 PRDM4Q9UKN5 801 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 TESMINQ9Y4I5 508 aa14.62□□□□□ -0.07
DDR1-231ENST00000417521 A0A0G2JPF8 293 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms