RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 FRS3O43559 492 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 CYTIPO60759 359 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 HNRNPCL1O60812 293 aaKnown RBP9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 RAMP1O60894 148 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 ATE1O95260 518 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 RAF1P04049 648 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 HNRNPCL4P0DMR1 293 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 IMPDH2P12268 514 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 RPS4Y1P22090 263 aaKnown RBP9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 CRYGSP22914 178 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 SLC1A3P43003 542 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 POLR2HP52434 150 aaKnown RBP9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 CSNK2A1P68400 391 aaPredicted RBP9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 BNIP2Q12982 314 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 SQLEQ14534 574 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 LIN52Q52LA3 116 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZNF311Q5JNZ3 666 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 PAMR1Q6UXH9 720 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 MTDHQ86UE4 582 aaKnown RBP9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 CMIPQ8IY22 773 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZNF100Q8IYN0 542 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 NFKBIDQ8NI38 313 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 OIT3Q8WWZ8 545 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 NINJ1Q92982 152 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 S100PBPQ96BU1 408 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 CACYBPQ9HB71 228 aaKnown RBP9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 CALML5Q9NZT1 146 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 VAPAQ9P0L0 249 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 GPR52Q9Y2T5 361 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 POLQO75417 2590 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 DOCK7Q96N67 2140 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 A0A0G2JND7 137 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 CDHR4A6H8M9 788 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 KLF4O43474 513 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 EDF1O60869 148 aaKnown RBP9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 GCM2O75603 506 aaPredicted RBP9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 LYZL6O75951 148 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 PLAUP00749 431 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 HOXB9P17482 250 aaPredicted RBP9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 FPR1P21462 350 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 IL32P24001 234 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 CXCR1P25024 350 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 ACAA2P42765 397 aaKnown RBP9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 HTR3AP46098 478 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 COPZ1P61923 177 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 CAPRIN1Q14444 709 aaKnown RBP9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 LARS2Q15031 903 aaKnown RBP9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 DEFB113Q30KQ7 82 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 SFRP5Q5T4F7 317 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 SPNS3Q6ZMD2 512 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 GALNT5Q7Z7M9 940 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 SERPINA11Q86U17 422 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 GABRG1Q8N1C3 465 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 UBE2J2Q8N2K1 259 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 SLC25A43Q8WUT9 341 aaPredicted RBP9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 DDIT4LQ96D03 193 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZHX1-C8orf76Q96EF9 292 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 PLPPR2Q96GM1 343 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 FOXC2Q99958 501 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 PRR14Q9BWN1 585 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 ADAM19Q9H013 955 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 RAD21L1Q9H4I0 556 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 BCO1Q9HAY6 547 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 A4GALTQ9NPC4 353 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 FANCFQ9NPI8 374 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 TMEM181Q9P2C4 612 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 NOSIPQ9Y314 301 aaKnown RBP9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 CHST2Q9Y4C5 530 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 MYO9AB2RTY4 2548 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 DSPPQ9NZW4 1301 aa9.03□□□□□ -0.96
NCKIPSD-202ENST00000413374 A0A1W2PP18 115 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 PGM3O95394 542 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 PMS2P2O95744 297 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 UQCRBP14927 111 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 CD53P19397 219 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 PSMB1P20618 241 aaKnown RBP9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 LOXP28300 417 aaPredicted RBP9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 AQP1P29972 269 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 NTF4P34130 210 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 MAGEA8P43361 318 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 OR3A2P47893 321 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 MRPL19P49406 292 aaKnown RBP9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 PCYT1AP49585 367 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 ATP4BP51164 291 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 CEACAM7Q14002 265 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 OR7A5Q15622 319 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 STK11Q15831 433 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 ACKR1Q16570 336 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 GLIPR1L2Q4G1C9 344 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 LRIF1Q5T3J3 769 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 GCNT6Q5T4J0 391 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 BHLHA15Q7RTS1 189 aaPredicted RBP9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 ATG4DQ86TL0 474 aaPredicted RBP9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF440Q8IYI8 595 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 STEAP2Q8NFT2 490 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 PMM1Q92871 262 aa9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 NAA11Q9BSU3 229 aaPredicted RBP9.02□□□□□ -0.97
NCKIPSD-202ENST00000413374 SPATA9Q9BWV2 254 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms