RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SLC37A3Q8NCC5 494 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 PLPP5Q8NEB5 264 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 OR13C2Q8NGS9 318 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 SETD6Q8TBK2 473 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 DOK4Q8TEW6 326 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 ELF4Q99607 663 aaPredicted RBP12.47□□□□□ -0.41
LIMS1-205ENST00000410093 ZNF649Q9BS31 505 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 TGIF2Q9GZN2 237 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 ATP13A2Q9NQ11 1180 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 BABAM2Q9NXR7 383 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 COPS7AQ9UBW8 275 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 CARD8Q9Y2G2 431 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 PCDHGB6Q9Y5F9 930 aa12.47□□□□□ -0.41
LIMS1-205ENST00000410093 FRYLO94915 3013 aa12.46□□□□□ -0.41
LIMS1-205ENST00000410093 hCG_2014768A0A024R1R8 64 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 FUOMA2VDF0 154 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 HRKO00198 91 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 IMPA2O14732 288 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 SDC3O75056 442 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 MT-ND5P03915 603 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 CYC1P08574 325 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF806P0C7X5 589 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 ALAS2P22557 587 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 F8A1P23610 371 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 ACY1Q03154 408 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 CRYZQ08257 329 aaKnown RBP12.46□□□□□ -0.42
LIMS1-205ENST00000410093 CRTC2Q53ET0 693 aaPredicted RBP12.46□□□□□ -0.42
LIMS1-205ENST00000410093 SOWAHCQ53LP3 525 aaPredicted RBP12.46□□□□□ -0.42
LIMS1-205ENST00000410093 OR2G6Q5TZ20 316 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 HLA-DQA1Q5Y7H0 255 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 TMEM71Q6P5X7 295 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 KIRREL2Q6UWL6 708 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 RABEPKQ7Z6M1 372 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 SLC35F3Q8IY50 421 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 CADM2Q8N3J6 435 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 SLC25A45Q8N413 288 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 OR4F15Q8NGB8 312 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 HAVCR2Q8TDQ0 301 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 TM9SF4Q92544 642 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 KIAA1143Q96AT1 154 aaPredicted RBP12.46□□□□□ -0.42
LIMS1-205ENST00000410093 ITPKCQ96DU7 683 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 GPX7Q96SL4 187 aaPredicted RBP12.46□□□□□ -0.42
LIMS1-205ENST00000410093 TEAD3Q99594 435 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 LAT2Q9GZY6 243 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 DTX4Q9Y2E6 619 aa12.46□□□□□ -0.42
LIMS1-205ENST00000410093 TMEM184BQ9Y519 407 aaPredicted RBP12.46□□□□□ -0.42
LIMS1-205ENST00000410093 RALGAPA1Q6GYQ0 2036 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 DAPL1A0PJW8 107 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 HAX1O00165 279 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 PLD2O14939 933 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF264O43296 627 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 EIF4E2O60573 245 aaKnown RBP12.45□□□□□ -0.42
LIMS1-205ENST00000410093 OR7A10O76100 309 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 CDRT1O95170 752 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 BCKDHBP21953 392 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 SLC2A5P22732 501 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 GRK6P43250 576 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 HSF2Q03933 536 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 GGTLC2Q14390 218 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.45□□□□□ -0.42
LIMS1-205ENST00000410093 DDI2Q5TDH0 399 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 NKAIN2Q5VXU1 208 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 PMS2CLQ68D20 193 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 METAP1DQ6UB28 335 aaPredicted RBP12.45□□□□□ -0.42
LIMS1-205ENST00000410093 SLC29A4Q7RTT9 530 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 BTLAQ7Z6A9 289 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 LHFPL3Q86UP9 236 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 GATAD2AQ86YP4 633 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 LYSMD2Q8IV50 215 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 OR51G2Q8NGK0 314 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 OR4C3Q8NH37 302 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 OR1L3Q8NH93 324 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 ACOT12Q8WYK0 555 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 ADIPOR1Q96A54 375 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 ALG8Q9BVK2 526 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 YIPF2Q9BWQ6 316 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 RNF167Q9H6Y7 350 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 MCCC2Q9HCC0 563 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 PNO1Q9NRX1 252 aaKnown RBP12.45□□□□□ -0.42
LIMS1-205ENST00000410093 DLL3Q9NYJ7 618 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 CHRNA9Q9UGM1 479 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 CMAHPQ9Y471 501 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 SDK1Q7Z5N4 2213 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 PCDH15Q96QU1 1955 aa12.45□□□□□ -0.42
LIMS1-205ENST00000410093 A0A1B0GVT2 93 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ELOA3DA6NLF2 546 aaPredicted RBP12.44□□□□□ -0.42
LIMS1-205ENST00000410093 C12orf71A8MTZ7 269 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 GTPBP1O00178 669 aaKnown RBP12.44□□□□□ -0.42
LIMS1-205ENST00000410093 SOCS6O14544 535 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 SLC2A10O95528 541 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 NTN1O95631 604 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 APOA1P02647 267 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 CD1AP06126 327 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 SBK2P0C263 348 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 FUT1P19526 365 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 PNLIPRP2P54317 469 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 RPS4XP62701 263 aaKnown RBP12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ACTA2P62736 377 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 ACTG2P63267 376 aa12.44□□□□□ -0.42
LIMS1-205ENST00000410093 SKP2Q13309 424 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms