RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 C18orf21Q32NC0 220 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 ZNF542PQ5EBM4 170 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ZC2HC1BQ5TFG8 222 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 PRR27Q6MZM9 219 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 CGB2Q6NT52 195 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 IYDQ6PHW0 289 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 FRA10AC1Q70Z53 315 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 SLC16A9Q7RTY1 509 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 LRRC70Q7Z2Q7 622 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 TBC1D21Q8IYX1 336 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 LRRC34Q8IZ02 419 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ARHGAP24Q8N264 748 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 TCAIMQ8N3R3 496 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 SFRP1Q8N474 314 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ZNF383Q8NA42 475 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 OR5AR1Q8NGP9 310 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 OR9A1PQ8NGU1 263 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 MCOLN3Q8TDD5 553 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 PHLDA1Q8WV24 401 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 DYDC1Q8WWB3 177 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 HPSE2Q8WWQ2 592 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 TFGQ92734 400 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 EXT2Q93063 718 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ESAMQ96AP7 390 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 RAD51AP1Q96B01 352 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 MOCOSQ96EN8 888 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 CHMP6Q96FZ7 201 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 NSL1Q96IY1 281 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 CNDP1Q96KN2 507 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 C12orf66Q96MD2 445 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 FOPNLQ96NB1 174 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 OR4K3Q96R72 315 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 PAIP2Q9BPZ3 127 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 TRAF4Q9BUZ4 470 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 KIR3DX1Q9H7L2 352 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 A4GALTQ9NPC4 353 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 SLCO1B3Q9NPD5 702 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 OLAHQ9NV23 265 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 UTP6Q9NYH9 597 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 CD274Q9NZQ7 290 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 SPATA7Q9P0W8 599 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 STOX2Q9P2F5 926 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 SPASTQ9UBP0 616 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 APOBEC3BQ9UH17 382 aaKnown RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 MOSPD1Q9UJG1 213 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ZNF225Q9UK10 706 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 PCTPQ9UKL6 214 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 PSMD13Q9UNM6 376 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 ASF1AQ9Y294 204 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 COL27A1Q8IZC6 1860 aaPredicted RBP3.75□□□□□ -1.81
CLK1-203ENST00000409769 CUL9Q8IWT3 2517 aa3.75□□□□□ -1.81
CLK1-203ENST00000409769 SPTBP11277 2137 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 MUC6Q6W4X9 2439 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 IGHV4-4A0A075B6R2 117 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 KCNE1BA0A087WTH5 132 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 A0A1B0GTQ1 180 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 hCG_1809904A0A1W2PP81 198 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 A0A1W2PPE2 198 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 A0A1W2PR64 198 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 MEIOCA2RUB1 952 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 GMNCA6NCL1 334 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 NCF1BA6NI72 391 aaPredicted RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 OR5K4A6NMS3 321 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 OR52A4PA6NMU1 304 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 NCF1CA8MVU1 366 aaPredicted RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 LMO7DNF2Z398 122 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 K7EPI3 171 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 OR7A17O14581 309 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 SEC16AO15027 2179 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 AQP9O43315 295 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 STK16O75716 305 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 DFFBO76075 338 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 SUPT7LO94864 414 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 FAM107AO95990 144 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 RPN2P04844 631 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 ABCB1P08183 1280 aaPredicted RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 FGF4P08620 206 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 IGHV4-31P0DP07 118 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 GFAPP14136 432 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 NCF1P14598 390 aaPredicted RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 PRDX3P30048 256 aaKnown RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 PEBP1P30086 187 aaKnown RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 HSD17B2P37059 387 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 SLC1A6P48664 564 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 RAB28P51157 221 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 NAGLUP54802 743 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 TPD52P55327 224 aaPredicted RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 C21orf59P57076 290 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 HNRNPKP61978 463 aaKnown RBP eCLIP3.74□□□□□ -1.81
CLK1-203ENST00000409769 TBPL1P62380 186 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 CBX1P83916 185 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 ASPHQ12797 758 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 LCP2Q13094 533 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 STX3Q13277 289 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 C1orf61Q13536 156 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 FASTKQ14296 549 aaKnown RBP3.74□□□□□ -1.81
CLK1-203ENST00000409769 ELOCQ15369 112 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 UGT3A2Q3SY77 523 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 GGTA1PQ4G0N0 100 aa3.74□□□□□ -1.81
CLK1-203ENST00000409769 FBXO48Q5FWF7 155 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms