RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SYNGR4O95473 234 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 CRHP06850 196 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 C8BP07358 591 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 BMP5P22003 454 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 CLK1P49759 484 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 HOXC5Q00444 222 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 FOXF2Q12947 444 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 DUSP7Q16829 419 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 EEF1A1P5Q5VTE0 462 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 GCNT2Q8N0V5 402 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 CADM2Q8N3J6 435 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 CPNE4Q96A23 557 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 TAMM41Q96BW9 452 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 OR5B2Q96R09 309 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 USP22Q9UPT9 525 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 TMED7Q9Y3B3 224 aa17.79■□□□□ 0.44
PDLIM2-207ENST00000409417 MED12LQ86YW9 2145 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 ZNF208O43345 1280 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 OPN1SWP03999 348 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 KCNJ5P48544 419 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 CRYBA2P53672 197 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 RAC3P60763 192 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 PSME3P61289 254 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 LIPEQ05469 1076 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 KRT72Q14CN4 511 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 FITM2Q8N6M3 262 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 RASSF5Q8WWW0 418 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 PRRG4Q9BZD6 226 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 ARL8BQ9NVJ2 186 aa17.78■□□□□ 0.44
PDLIM2-207ENST00000409417 A0A1W2PNR3 127 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 ELOVL7A1L3X0 281 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 NKX2-6A6NCS4 301 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 NME4O00746 187 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 LGI1O95970 557 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 TFPIP10646 304 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 CD247P20963 164 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 CXCR1P25024 350 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 CPA2P48052 419 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 RGS8P57771 180 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 TFF3Q07654 80 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 ZNF239Q16600 458 aaKnown RBP17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 PPP4R4Q6NUP7 873 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 TMPPEQ6ZT21 453 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 MICU2Q8IYU8 434 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 LSMEM1Q8N8F7 131 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 GPR32P1Q8NGA4 272 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 SLC26A7Q8TE54 656 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 SRXN1Q9BYN0 137 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 TRIM2Q9C040 744 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 OR11A1Q9GZK7 315 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 SPAG4Q9NPE6 437 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 ABCD2Q9UBJ2 740 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 HDGFL3Q9Y3E1 203 aa17.77■□□□□ 0.44
PDLIM2-207ENST00000409417 UNC79Q9P2D8 2635 aa17.77■□□□□ 0.43
PDLIM2-207ENST00000409417 A0A1W2PNV4 684 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 TMEM72A0PK05 275 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 TNFSF13O75888 250 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 IFNA14P01570 189 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 CCNA2P20248 432 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 GRNP28799 593 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 DIO1P49895 249 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 MNAT1P51948 309 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 AGFG1P52594 562 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 RELL2Q8NC24 303 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 C3orf49Q96BT1 292 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 DDIT4LQ96D03 193 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 ARL5BQ96KC2 179 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 ZNF559Q9BR84 538 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 ALG2Q9H553 416 aa17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 TESQ9UGI8 421 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-207ENST00000409417 SULT2B1O00204 365 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 COL8A1P27658 744 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 HTR2AP28223 471 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 CSNK2A1P68400 391 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 MYBPHQ13203 477 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 GUSBP1Q15486 140 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 NRF1Q16656 503 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 SP5Q6BEB4 398 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 GTF2IRD2BQ6EKJ0 949 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 GTF2IRD2Q86UP8 949 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 OR52E4Q8NGH9 312 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 ROBO4Q8WZ75 1007 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 GMPPAQ96IJ6 420 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 ARHGDIGQ99819 225 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 WFDC6Q9BQY6 131 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 GLRX2Q9NS18 164 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 GMPR2Q9P2T1 348 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 RPS6KB2Q9UBS0 482 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 TRAPPC4Q9Y296 219 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 FMO6PO60774 539 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 FESP07332 822 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 KDELR2P33947 212 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 KIR2DL2P43627 348 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 GSK3BP49841 420 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 NCALDP61601 193 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 FCRLAQ7L513 359 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 ATG4DQ86TL0 474 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 RANBP3LQ86VV4 465 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 BCAS4Q8TDM0 211 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 RNF128Q8TEB7 428 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms