RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 RAD9AQ99638 391 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 OR8D2Q9GZM6 311 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 CENPMQ9NSP4 180 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 ASB6Q9NWX5 421 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 SAGE1Q9NXZ1 904 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 PLEKHA6Q9Y2H5 1048 aa7.71□□□□□ -1.17
SNX13-201ENST00000409076 EDDM13A0A1B0GTR0 161 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 A0A1B0GVI7 797 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 METTL12A8MUP2 240 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 GOSR2O14653 212 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 SURF4O15260 269 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 B3GALT2O43825 422 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 STX11O75558 287 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 F3P13726 295 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 M6PRP20645 277 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 HLA-DMAP28067 261 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 PPM1AP35813 382 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 KIF26BQ2KJY2 2108 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 YIF1BQ5BJH7 314 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 ARMC6Q6NXE6 501 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 LCTLQ6UWM7 567 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 ZNF680Q8NEM1 530 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 OR56A1Q8NGH5 318 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 MOSPD2Q8NHP6 518 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 RBM18Q96H35 190 aaKnown RBP7.71□□□□□ -1.18
SNX13-201ENST00000409076 METTL2AQ96IZ6 378 aaKnown RBP7.71□□□□□ -1.18
SNX13-201ENST00000409076 A4GALTQ9NPC4 353 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 HRASLS2Q9NWW9 162 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 SCML1Q9UN30 329 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 GBF1Q92538 1859 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 IGKV1-8A0A0C4DH67 115 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 MAN2B1O00754 1011 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 P2RX6O15547 441 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 SDC3O75056 442 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 TFPIP10646 304 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 CST5P28325 142 aaPredicted RBP7.71□□□□□ -1.18
SNX13-201ENST00000409076 RPL35P42766 123 aaKnown RBP7.71□□□□□ -1.18
SNX13-201ENST00000409076 EMDP50402 254 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 GBX2P52951 348 aaPredicted RBP7.71□□□□□ -1.18
SNX13-201ENST00000409076 CST6Q15828 149 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 AMZ1Q400G9 498 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 C3orf38Q5JPI3 329 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 PRAMEF17Q5VTA0 474 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 SIGIRRQ6IA17 410 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 FAM109BQ6ICB4 259 aaPredicted RBP7.71□□□□□ -1.18
SNX13-201ENST00000409076 HEPHL1Q6MZM0 1159 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 ABHD17CQ6PCB6 329 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 Q6ZTK2 550 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 NRROSQ86YC3 692 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 JAGN1Q8N5M9 183 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 POGLUT1Q8NBL1 392 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 OR52R1Q8NGF1 315 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 ASB12Q8WXK4 309 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 FGF13Q92913 245 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 SAV1Q9H4B6 383 aaPredicted RBP7.71□□□□□ -1.18
SNX13-201ENST00000409076 KRCC1Q9NPI7 259 aaPredicted RBP7.71□□□□□ -1.18
SNX13-201ENST00000409076 PRSS16Q9NQE7 514 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 NPAP1Q9NZP6 1156 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 KLHL21Q9UJP4 597 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 ABCA7Q8IZY2 2146 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 REV3LO60673 3130 aa7.71□□□□□ -1.18
SNX13-201ENST00000409076 TRPM7Q96QT4 1865 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 TPRP12270 2363 aaKnown RBP7.7□□□□□ -1.18
SNX13-201ENST00000409076 TRAV18A0A075B6X5 111 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 C13orf42A0A1B0GVH6 325 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 A0A1W2PRQ8 180 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 M0QYG6 137 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 FGF17O60258 216 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 HMGN1P05114 100 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 HIST1H1CP16403 213 aaKnown RBP7.7□□□□□ -1.18
SNX13-201ENST00000409076 VAMP1P23763 118 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 PRPH2P23942 346 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 ETV6P41212 452 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 DCST2Q5T1A1 773 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 ZNF620Q6ZNG0 422 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 MEPCEQ7L2J0 689 aaKnown RBP7.7□□□□□ -1.18
SNX13-201ENST00000409076 CD163Q86VB7 1156 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 JAZF1Q86VZ6 243 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 MORN4Q8NDC4 146 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 OR2L3Q8NG85 312 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 SYNPRQ8TBG9 265 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 SETD6Q8TBK2 473 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 Q96M85 177 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 HHIPQ96QV1 700 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 TEAD3Q99594 435 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 ACTRT3Q9BYD9 372 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 AICDAQ9GZX7 198 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.7□□□□□ -1.18
SNX13-201ENST00000409076 ZSCAN32Q9NX65 697 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 POLHQ9Y253 713 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 SLC9A3R1O14745 358 aaPredicted RBP7.7□□□□□ -1.18
SNX13-201ENST00000409076 PDGFAP04085 211 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 GTF2F2P13984 249 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 CTSEP14091 401 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 AQP2P41181 271 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 PPP2CBP62714 309 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 PPP2CAP67775 309 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 PON3Q15166 354 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 PCGF3Q3KNV8 242 aa7.7□□□□□ -1.18
SNX13-201ENST00000409076 KIAA0907Q7Z7F0 614 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms