RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CCDC106Q9BWC9 280 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 QRSL1Q9H0R6 528 aaKnown RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 SLC38A1Q9H2H9 487 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 CXorf56Q9H5V9 222 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 TCF7L2Q9NQB0 619 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 TMEM181Q9P2C4 612 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 ZNF232Q9UNY5 417 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 CORO2BQ9UQ03 480 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 TRAPPC4Q9Y296 219 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 SLC9A8Q9Y2E8 581 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 IFT52Q9Y366 437 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 USH1CQ9Y6N9 552 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 IGKV3D-15A0A087WSY6 115 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 TMED7-TICAM2A0A0A6YYA0 188 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 A0A0G2JPF8 293 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 CENPVL1A0A0U1RR11 272 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 HMGB1P1B2RPK0 211 aaPredicted RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 HNRNPCL2B2RXH8 293 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 HNRNPCL3B7ZW38 293 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 C5orf58C9J3I9 102 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 HNRNPCL1O60812 293 aaKnown RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 GCM2O75603 506 aaPredicted RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 GSNP06396 782 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 CD3EP07766 207 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 THBS1P07996 1170 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 CHRM4P08173 479 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 VIMP08670 466 aaKnown RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 HNRNPCL4P0DMR1 293 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 CXCR1P25024 350 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 IL12AP29459 219 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 CDKN2CP42773 168 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 IDH2P48735 452 aaKnown RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 ADAM8P78325 824 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 FOXD4Q12950 439 aaPredicted RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 CAPRIN1Q14444 709 aaKnown RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 MAPK14Q16539 360 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 SYPL1Q16563 259 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 SLC9B1Q4ZJI4 515 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 Q5PR19 223 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 MRPL2Q5T653 305 aaKnown RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 RNF220Q5VTB9 566 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 EPGNQ6UW88 154 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 PRSS57Q6UWY2 283 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 DNAJC14Q6Y2X3 702 aaPredicted RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 BHLHA15Q7RTS1 189 aaPredicted RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 BIVMQ86UB2 503 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 ANKFN1Q8N957 763 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 OR52P1PQ8NH57 321 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 PNPT1Q8TCS8 783 aaKnown RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 APH1AQ96BI3 265 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 S100PBPQ96BU1 408 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 PLPPR2Q96GM1 343 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 MARK4Q96L34 752 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 ATP6V1G3Q96LB4 118 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 KLHDC3Q9BQ90 382 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 INPP5KQ9BT40 448 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 CCDC28BQ9BUN5 200 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 TAPBPLQ9BX59 468 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 RABEP2Q9H5N1 569 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 PIF1Q9H611 641 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 TPT1P8Q9HAU6 139 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 CTPS2Q9NRF8 586 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 MRGBPQ9NV56 204 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 FAIMQ9NVQ4 179 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 PARPBPQ9NWS1 579 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 NOSIPQ9Y314 301 aaKnown RBP8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 TMED7Q9Y3B3 224 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 RNF115Q9Y4L5 304 aa8.07□□□□□ -1.12
SNORD88A-201ENST00000408314 DSPPQ9NZW4 1301 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 IGHV3-15A0A0B4J1V0 119 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 CDHR4A6H8M9 788 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 C9JVG2 144 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 HS3ST1O14792 307 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 SIAH2O43255 324 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 KLF4O43474 513 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 MRPL33O75394 65 aaKnown RBP8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 ADAP00813 363 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 BCHEP06276 602 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 GPIP06744 558 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 THBDP07204 575 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 GGT1P19440 569 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 NCF2P19878 526 aaPredicted RBP8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 COX5AP20674 150 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 ADSLP30566 484 aaPredicted RBP8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 HOXC12P31275 282 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 IDUAP35475 653 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 SLC16A1P53985 500 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 OR2B6P58173 313 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 TGFBR3Q03167 851 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 EPS8Q12929 822 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 ETFDHQ16134 617 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 TIMM23BQ5SRD1 257 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 WBP2NLQ6ICG8 309 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 ADAM5Q6NVV9 412 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 C5orf46Q6UWT4 87 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 HDXQ7Z353 690 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 NUFIP2Q7Z417 695 aaKnown RBP8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 KRT73Q86Y46 540 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 UBE2J2Q8N2K1 259 aa8.06□□□□□ -1.12
SNORD88A-201ENST00000408314 ZNF611Q8N823 705 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms