RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 TTTY12Q9BZ98 90 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 DEFB127Q9H1M4 99 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 TSPAN10Q9H1Z9 355 aaPredicted RBP7.56□□□□□ -1.2
GPC3-203ENST00000406757 NTN4Q9HB63 628 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ZFP64Q9NPA5 681 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 EXOSC3Q9NQT5 275 aaKnown RBP7.56□□□□□ -1.2
GPC3-203ENST00000406757 ACER3Q9NUN7 267 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 MED17Q9NVC6 651 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 TAS2R10Q9NYW0 307 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 RPS6KB2Q9UBS0 482 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 DKKL1Q9UK85 242 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 KLF13Q9Y2Y9 288 aaPredicted RBP7.56□□□□□ -1.2
GPC3-203ENST00000406757 IGLV3-32A0A0A0MS00 114 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TMEM72A0PK05 275 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TRAPPC13A5PLN9 417 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 KLRC4-KLRK1H3BQV0 150 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 PDLIM1O00151 329 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TNFRSF11BO00300 401 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 KPNA4O00629 521 aaPredicted RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 EFNA2O43921 213 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ZIC3O60481 467 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 CBR3O75828 277 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 GADD45GO95257 159 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 H1F0P07305 194 aaKnown RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 PRKCAP17252 672 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ITGA2P17301 1181 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 RHCEP18577 417 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ENDOUP21128 410 aaKnown RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 CBLP22681 906 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 DPP4P27487 766 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 MSX1P28360 303 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 MAGEA5P43359 124 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 SLC6A8P48029 635 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ZNF41P51814 821 aaPredicted RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 PPIAP62937 165 aaKnown RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 MERTKQ12866 999 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ZNF169Q14929 603 aaPredicted RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 SEC23BQ15437 767 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ATP6AP1Q15904 470 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ZSWIM7Q19AV6 140 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 LRRC36Q1X8D7 754 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 PLPPR5Q32ZL2 321 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ALG10BQ5I7T1 473 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 FGD3Q5JSP0 725 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 C1QL3Q5VWW1 255 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 WBP2NLQ6ICG8 309 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ZFP1Q6P2D0 407 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 PODNL1Q6PEZ8 512 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 IGFL3Q6UXB1 125 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 Q6ZS92 163 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 PQLC1Q8N2U9 271 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TMEM251Q8N6I4 163 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TMEM178AQ8NBL3 297 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 PIK3C3Q8NEB9 887 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 OR14L1PQ8NHC6 308 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TMEM255BQ8WV15 326 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 OIT3Q8WWZ8 545 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TM9SF4Q92544 642 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 C3orf49Q96BT1 292 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 PRRC1Q96M27 445 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ZNF347Q96SE7 839 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 PRSS27Q9BQR3 290 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TRIM2Q9C040 744 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TMEM185BQ9H7F4 350 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 PTGES2Q9H7Z7 377 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 YY1AP1Q9H869 796 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 NMNAT1Q9HAN9 279 aaPredicted RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 AGPAT4Q9NRZ5 378 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 MAN2C1Q9NTJ4 1040 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TNFRSF10DQ9UBN6 386 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 DNAJB9Q9UBS3 223 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 TESQ9UGI8 421 aaKnown RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 BOKQ9UMX3 212 aaPredicted RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 C15orf41Q9Y2V0 281 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 SLC6A5Q9Y345 797 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 SAMHD1Q9Y3Z3 626 aaKnown RBP7.55□□□□□ -1.2
GPC3-203ENST00000406757 CSMD2Q7Z408 3487 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 ITPR2Q14571 2701 aa7.55□□□□□ -1.2
GPC3-203ENST00000406757 LRBAP50851 2863 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 TMED7-TICAM2A0A0A6YYA0 188 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 A0A0B4J2E0 115 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 A0A1B0GX12 115 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 ELOA3DA6NLF2 546 aaPredicted RBP7.54□□□□□ -1.2
GPC3-203ENST00000406757 FAM47E-STBD1D6RA91 191 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 LRRTM2O43300 516 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 E2F6O75461 281 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 OR5F1O95221 314 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 PEPDP12955 493 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 ELAVL4P26378 380 aaKnown RBP7.54□□□□□ -1.2
GPC3-203ENST00000406757 SLC1A3P43003 542 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 STARP49675 285 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 UGT2B15P54855 530 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 DSCR4P56555 118 aaPredicted RBP7.54□□□□□ -1.2
GPC3-203ENST00000406757 TRAM2Q15035 370 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 ELOA3BQ3SY89 546 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 RAET1LQ5VY80 246 aa7.54□□□□□ -1.2
GPC3-203ENST00000406757 ATG4DQ86TL0 474 aaPredicted RBP7.54□□□□□ -1.2
GPC3-203ENST00000406757 ADGRG3Q86Y34 549 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms