RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ATP5A1P25705 553 aaKnown RBP3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 PTGER3P43115 390 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 BRCC3P46736 316 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 RPL34P49207 117 aaKnown RBP3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 AP3M2P53677 418 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 HILS1P60008 231 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 KRTAP10-6P60371 365 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 PLOD1Q02809 727 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 CCL14Q16627 93 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 WHAMMP3Q1A5X7 153 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 MAJINQ3KP22 176 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 FAM74A3Q4VXF1 159 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 MS4A13Q5J8X5 152 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 SEL1L2Q5TEA6 688 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZC2HC1BQ5TFG8 222 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ATF7IP2Q5U623 682 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 FAM219BQ5XKK7 198 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 OR8G2PQ6IF36 304 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 METTL7BQ6UX53 244 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 Q6ZPB1 254 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 LANCL3Q6ZV70 420 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 C16orf62Q7Z3J2 963 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ACOT1Q86TX2 421 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 SLC35F6Q8N357 371 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 CEP112Q8N8E3 955 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF491Q8N8L2 437 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 STXBP6Q8NFX7 210 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 OR13C2Q8NGS9 318 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 RFESDQ8TAC1 157 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 MIPOL1Q8TD10 442 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 SCFD1Q8WVM8 642 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZBED3Q96IU2 234 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 NAPGQ99747 312 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 CAPS2Q9BXY5 557 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 PARD6BQ9BYG5 372 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 VCPKMTQ9H867 229 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF446Q9NWS9 450 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ELOVL2Q9NXB9 296 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 DCAF16Q9NXF7 216 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 GNG12Q9UBI6 72 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ASIC3Q9UHC3 531 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 ANAPC7Q9UJX3 599 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 GUCA1BQ9UMX6 200 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 NPIPA1Q9UND3 350 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 SBF2Q86WG5 1849 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 CNTNAP1P78357 1384 aa3.85□□□□□ -1.79
HMGB3P18-201ENST00000406327 NRXN2Q9P2S2 1712 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 LAMB1P07942 1786 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 ECM29Q5VYK3 1845 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 BAZ2AQ9UIF9 1905 aaKnown RBP3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 IGLV3-22A0A075B6J6 115 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 IGHV3OR16-10A0A075B7F0 116 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 PRR23D1E9PI22 279 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 H0Y8G0 127 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 CETN3O15182 167 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 STX7O15400 261 aaKnown RBP3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZG16O60844 167 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 NOL4O94818 638 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 SLITRK3O94933 977 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 LCA5LO95447 670 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 PLEKP08567 350 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 HSMCR30P0CW71 290 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 PRR23D2P0DMB1 279 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 CPN1P15169 458 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 PGCP20142 388 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 MAGEA5P43359 124 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 SULT1E1P49888 294 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 RGS1Q08116 209 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 RIPPLY1Q0D2K3 151 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 SPA17Q15506 151 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 CHI3L2Q15782 390 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 SYPL1Q16563 259 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 MICAQ29983 383 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 SNAI3Q3KNW1 292 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 KLHL22Q53GT1 634 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF506Q5JVG8 444 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 CCDC122Q5T0U0 273 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 C9orf66Q5T8R8 295 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 PYHIN1Q6K0P9 492 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 KIAA1328Q86T90 577 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 NELFCDQ8IXH7 590 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 KRT222Q8N1A0 295 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 SPEM1Q8N4L4 309 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 BHLHE23Q8NDY6 225 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 OR10A7Q8NGE5 316 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 SLC41A3Q96GZ6 507 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 SH3YL1Q96HL8 342 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 CCDC42Q96M95 316 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 PSKH2Q96QS6 385 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 TSGA10Q9BZW7 698 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 DEFB129Q9H1M3 183 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 HEXA-AS1Q9H8Q6 139 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 FAM120CQ9NX05 1096 aaKnown RBP3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 EHFQ9NZC4 300 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 PIPOXQ9P0Z9 390 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 RNF24Q9Y225 148 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 TRAF3IP3Q9Y228 551 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 MOB4Q9Y3A3 225 aa3.84□□□□□ -1.79
HMGB3P18-201ENST00000406327 IGHV3-16A0A0C4DH30 117 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms