RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CCR2P41597 374 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 PTGFRP43088 359 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 MAGEA11P43364 429 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 ZFP36L2P47974 494 aaKnown RBP5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 POLR2LP62875 67 aaKnown RBP5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 BCL2L1Q07817 233 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 FGL1Q08830 312 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 C5orf64Q2M2E5 130 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 KLHL22Q53GT1 634 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 ABHD17BQ5VST6 288 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 GLYATQ6IB77 296 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 TMEM108Q6UXF1 575 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 DPY19L3Q6ZPD9 716 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 TMEM126BQ8IUX1 230 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 PLD3Q8IV08 490 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 LAX1Q8IWV1 398 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 KLHDC8BQ8IXV7 354 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 CPEB3Q8NE35 698 aaKnown RBP5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 OR56A4Q8NGH8 313 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 OR4A16Q8NH70 328 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 ORAI1Q96D31 301 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 MED8Q96G25 268 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 PPP1R16AQ96I34 528 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 WRAP53Q9BUR4 548 aaKnown RBP5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 PAPOLGQ9BWT3 736 aaKnown RBP5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 DGCR6LQ9BY27 220 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 OR2B2Q9GZK3 357 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 CCDC90BQ9GZT6 254 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 RACGAP1Q9H0H5 632 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 LRRN3Q9H3W5 708 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 SLC2A8Q9NY64 477 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 MYOTQ9UBF9 498 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 C3orf18Q9UK00 162 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 ZNF490Q9ULM2 529 aaPredicted RBP5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 CELSR3Q9NYQ7 3312 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 hCG_2039718K7EN88 272 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 P2RY10O00398 339 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 CNOT3O75175 753 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 CPSF4O95639 269 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF682O95780 498 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZDHHC11BP0C7U3 371 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 GIMD1P0DJR0 217 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 ITGA3P26006 1051 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 SHMT2P34897 504 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 RPL5P46777 297 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 MTAPQ13126 283 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 DUSP8Q13202 625 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 NFATC2Q13469 925 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 PRMT9Q6P2P2 845 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 SPESP1Q6UW49 350 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 MARVELD2Q8N4S9 558 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 IL22RA1Q8N6P7 574 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 BPIFB6Q8NFQ5 453 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 CHPT1Q8WUD6 406 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 PIH1D2Q8WWB5 315 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 GTF2H4Q92759 462 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF775Q96BV0 537 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF599Q96NL3 588 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 HIST1H2AAQ96QV6 131 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 HDHD5Q9BXW7 423 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 Q9H521 79 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 RAB9BQ9NP90 201 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF701Q9NV72 531 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 AIG1Q9NVV5 245 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 ATG4BQ9Y4P1 393 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 MRPS18BQ9Y676 258 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 WNT6Q9Y6F9 365 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 COL4A6Q14031 1691 aa5.71□□□□□ -1.5
TRAPPC13-202ENST00000399438 GLYATL1P3A0A0U1RQE8 302 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 TCRBV3S1A0A5B6 114 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 FAM92AA1XBS5 289 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 CLEC18AA5D8T8 446 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 PRR23AA6NEV1 266 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 SERPINE3A8MV23 424 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 HIDE1A8MVS5 230 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 NPIPB11E5RHQ5 1161 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 M0R129 80 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 RFXAPO00287 272 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 GNGT2O14610 69 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 BCAS1O75363 584 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 PSIP1O75475 530 aaKnown RBP5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR2F2O95006 317 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 TNFAIP8O95379 198 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 ERCC1P07992 297 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 HLA-EP13747 358 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 CPN1P15169 458 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 FASP25445 335 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 TTPAP49638 278 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 TAS2R50P59544 299 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 AP3S2P59780 193 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 CMPK2Q5EBM0 449 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 PLPP4Q5VZY2 271 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 CCDC144NLQ6NUI1 221 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZFP1Q6P2D0 407 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 CLEC18BQ6UXF7 455 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 DOK3Q7L591 496 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 C16orf62Q7Z3J2 963 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 CLEC18CQ8NCF0 446 aa5.7□□□□□ -1.5
TRAPPC13-202ENST00000399438 FAM83FQ8NEG4 500 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms