RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CA5BQ9Y2D0 317 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 WDR45Q9Y484 360 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 RIIAD1A6NNX1 92 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 SIX6O95475 246 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 C8AP07357 584 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 GIPP09681 153 aaPredicted RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 MAT2AP31153 395 aaKnown RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 MAZP56270 477 aaKnown RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 DHODHQ02127 395 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 ZNF433Q8N7K0 673 aaPredicted RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 MARC2Q969Z3 335 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 ZMYND19Q96E35 227 aaPredicted RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 LCORQ96JN0 433 aaPredicted RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 DMRTA2Q96SC8 542 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 CACYBPQ9HB71 228 aaKnown RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 PRDM7Q9NQW5 492 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 CES1P1Q9UKY3 287 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 PCDHGA5Q9Y5G8 931 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 ANXA2P2A6NMY6 339 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 KRBOX1C9JBD0 128 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 ARL6IP5O75915 188 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 SERPINA3P01011 423 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 CSF2RAP15509 400 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 FERD3LQ96RJ6 166 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 WSB2Q9NYS7 404 aaPredicted RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 NTMQ9P121 344 aa12.92□□□□□ -0.34
APOB-202ENST00000399256 RABL2AQ9UBK7 228 aaPredicted RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 FBXO9Q9UK97 447 aaPredicted RBP12.92□□□□□ -0.34
APOB-202ENST00000399256 NPIPA5A0A0B4J1W7 369 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 A8MXK9 166 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 NPIPA7E9PJI5 369 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 PDCD5O14737 125 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 SIGLEC5O15389 551 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 VEGFDO43915 354 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 KRT33AO76009 404 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 NPIPA8P0DM63 369 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 PSMB10P40306 273 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 NAA10P41227 235 aaPredicted RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 MAGEB1P43366 347 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 SIGLEC14Q08ET2 396 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 ABHD17CQ6PCB6 329 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 FAM199XQ6PEV8 388 aaPredicted RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 FCRLAQ7L513 359 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 PELI1Q96FA3 418 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 OR1F2PQ96R84 312 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 DPYSL5Q9BPU6 564 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 ZNF275Q9NSD4 429 aaPredicted RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 POT1Q9NUX5 634 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 KLHL9Q9P2J3 617 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 HRH3Q9Y5N1 445 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 TRAPPC13A5PLN9 417 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 CREBL2O60519 120 aaPredicted RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 RP2O75695 350 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 RPN2P04844 631 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 IFNGR1P15260 489 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 SLC2A5P22732 501 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 DCTDP32321 178 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 RAP2BP61225 183 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 MELKQ14680 651 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 CDK5R1Q15078 307 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 TEAD2Q15562 447 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 OR1Q1Q15612 314 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 HEPHL1Q6MZM0 1159 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 LRFN4Q6PJG9 635 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 ATRAIDQ6UW56 229 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 ASPGQ86U10 573 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 RANBP3LQ86VV4 465 aaPredicted RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 OR6V1Q8N148 313 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 SPICQ8N5J4 248 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 OR7G2Q8NG99 324 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 OR4C6Q8NH72 309 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 SLC25A38Q96DW6 304 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 SMIM19Q96E16 107 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 LRIG1Q96JA1 1093 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 LGR4Q9BXB1 951 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 MCCC2Q9HCC0 563 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 USP36Q9P275 1121 aaKnown RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 ZNF780BQ9Y6R6 833 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 FXYD6-FXYD2A0A087WZ82 144 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 TRBV2A0A0J9YWF9 115 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 OR2M5A3KFT3 312 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 LATO43561 262 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 GALR3O60755 368 aaPredicted RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 RCBTB2O95199 551 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 ECDO95905 644 aaPredicted RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 UCHL1P09936 223 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 S100A11P31949 105 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 RPS11P62280 158 aaKnown RBP eCLIP12.91□□□□□ -0.34
APOB-202ENST00000399256 STPG1Q5TH74 334 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 MRM1Q6IN84 353 aaKnown RBP12.91□□□□□ -0.34
APOB-202ENST00000399256 TMUB2Q71RG4 321 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 DGLUCYQ7Z3D6 616 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 BPIFA2Q96DR5 249 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 GFI1Q99684 422 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 ARL6Q9H0F7 186 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 FXYD6Q9H0Q3 95 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 ZCCHC4Q9H5U6 513 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms