RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NGFRP08138 427 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 FUT1P19526 365 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 RPS7P62081 194 aaKnown RBP16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ACTA2P62736 377 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ACTG2P63267 376 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 HSF2Q03933 536 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ZNF791Q3KP31 576 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 FAM83FQ8NEG4 500 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR5W2Q8NH69 310 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR14A16Q8NHC5 309 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TXNDC15Q96J42 360 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ERMAPQ96PL5 475 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ADGRL4Q9HBW9 690 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 NPAP1Q9NZP6 1156 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 THADAQ6YHU6 1953 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR6C76A6NM76 312 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 GTPBP1O00178 669 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TO15178 435 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SERPINA3P01011 423 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 UBL4AP11441 157 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 MXD1Q05195 221 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 RIN1Q13671 783 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 CRMP1Q14194 572 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TTLL10Q6ZVT0 673 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 MARCH9Q86YJ5 346 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 LAX1Q8IWV1 398 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR8H2Q8N162 312 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR10H4Q8NGA5 316 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 HAVCR2Q8TDQ0 301 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 C3orf49Q96BT1 292 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 DIRAS2Q96HU8 199 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR51V1Q9H2C8 321 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TBC1D17Q9HA65 648 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ABCB9Q9NP78 766 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TMEM184BQ9Y519 407 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 C2orf92A0A1B0GVN3 265 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 A0A1W2PQD3 144 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TCRBV16S1A1N1A0A5B0 115 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ELOA3DA6NLF2 546 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ZNF264O43296 627 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SLC19A2O60779 497 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 GRK6P43250 576 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 RPS4XP62701 263 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 COL9A2Q14055 689 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 PON3Q15166 354 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ELOA3BQ3SY89 546 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 PTCRAQ6ISU1 281 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 GDPD3Q7L5L3 318 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ZSCAN1Q8NBB4 408 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 C17orf47Q8NEP4 570 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ELOA3Q8NG57 546 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SMPDL3BQ92485 455 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TIMP4Q99727 224 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TMED9Q9BVK6 235 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 LAT2Q9GZY6 243 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ZNF304Q9HCX3 659 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 NRIP3Q9NQ35 241 aa16.25■□□□□ 0.19
HLA-DQB1-204ENST00000399084 PNLIPP16233 465 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 CXCL12P48061 93 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 CSNK1EP49674 416 aaKnown RBP16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SQSTM1Q13501 440 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 FAM131AQ6UXB0 335 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 CCBE1Q6UXH8 406 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 VASH1Q7L8A9 365 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TMEM99Q8N816 258 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR5M3Q8NGP4 307 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 PHYHIPQ92561 330 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 HCAR1Q9BXC0 346 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 HDHD5Q9BXW7 423 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 MFRPQ9BY79 579 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 MIXL1Q9H2W2 232 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 MED20Q9H944 212 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 POLE4Q9NR33 117 aa16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 YARS2Q9Y2Z4 477 aaKnown RBP16.24■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SZT2Q5T011 3432 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SNPHO15079 494 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 EIF4E2O60573 245 aaKnown RBP16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TMEM127O75204 238 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 FBLP22087 321 aaKnown RBP16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ALAS2P22557 587 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 CD79BP40259 229 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 DIO1P49895 249 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SLC16A1P53985 500 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 NRG3P56975 720 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SKP2Q13309 424 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ASAH1Q13510 395 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ZNF79Q15937 498 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 CCDC58Q4VC31 144 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 EMC4Q5J8M3 183 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 VASNQ6EMK4 673 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TMEM91Q6ZNR0 172 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 PRR23CQ6ZRP0 262 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ATG4DQ86TL0 474 aaPredicted RBP16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 FAM98AQ8NCA5 519 aaKnown RBP16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR52E2Q8NGJ4 325 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ADIPOR1Q96A54 375 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SOSTQ9BQB4 213 aa16.23■□□□□ 0.19
HLA-DQB1-204ENST00000399084 FOXQ1Q9C009 403 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms