RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 NANOGQ9H9S0 305 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CACYBPQ9HB71 228 aaKnown RBP12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TMED7Q9Y3B3 224 aa12.58□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TMEM72A0PK05 275 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 FXYD1O00168 92 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SULT2B1O00204 365 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 FAAHO00519 579 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TPST1O60507 370 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SS18L1O75177 396 aaPredicted RBP12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 HTR3AP46098 478 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CTBP2P56545 445 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 FAM27E3Q08E93 113 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TRMT5Q32P41 509 aaKnown RBP12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 RABL3Q5HYI8 236 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 EEF1A1P5Q5VTE0 462 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TMPPEQ6ZT21 453 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF440Q8IYI8 595 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 POU5F2Q8N7G0 328 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 OR10A6Q8NH74 314 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SLC25A43Q8WUT9 341 aaPredicted RBP12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 LRRC58Q96CX6 371 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF559Q9BR84 538 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ADAM19Q9H013 955 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MRGBPQ9NV56 204 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 KCNN3Q9UGI6 736 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PROCRQ9UNN8 238 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 EMC9Q9Y3B6 208 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CAPN7Q9Y6W3 813 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MPDZO75970 2070 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 POLQO75417 2590 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZC3H12DA2A288 527 aaKnown RBP12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TUBAL3A6NHL2 446 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MRASO14807 208 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SMAD9O15198 467 aaKnown RBP12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CD8BP10966 210 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 UQCRBP14927 111 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 AGTR1P30556 359 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SSTR2P30874 369 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 POLR2HP52434 150 aaKnown RBP12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 BNIP2Q12982 314 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GTF2IRD2BQ6EKJ0 949 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF550Q7Z398 422 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SPATA21Q7Z572 469 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GTF2IRD2Q86UP8 949 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 KRT73Q86Y46 540 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 KIF18BQ86Y91 864 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 TUSC5Q8IXB3 177 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 C11orf65Q8NCR3 313 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF775Q96BV0 537 aaPredicted RBP12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 WFDC6Q9BQY6 131 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ARMC7Q9H6L4 198 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 C12orf49Q9H741 205 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PLSCR4Q9NRQ2 329 aa12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SPIN1Q9Y657 262 aaPredicted RBP12.57□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GCM2O75603 506 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PRKD3O94806 890 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 OPN1SWP03999 348 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 FESP07332 822 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ADSLP30566 484 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PRKAR1BP31321 381 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 LSP1P33241 339 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 KCNJ5P48544 419 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GZMMP51124 257 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 COPZ1P61923 177 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SORDQ00796 357 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 DMTNQ08495 405 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CYLC2Q14093 348 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 RNPS1Q15287 305 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MAPRE2Q15555 327 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZSWIM7Q19AV6 140 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 EXOC3L2Q2M3D2 409 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 COQ5Q5HYK3 327 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 WBP2NLQ6ICG8 309 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MTDHQ86UE4 582 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SMYD1Q8NB12 490 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 OR6K3Q8NGY3 331 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF607Q96SK3 696 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PRR14Q9BWN1 585 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MCCC2Q9HCC0 563 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 GLRX2Q9NS18 164 aa12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ING1Q9UK53 422 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PDZD2O15018 2839 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 BBIP1A8MTZ0 92 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ZNF814B7Z6K7 855 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 DYNC1I1O14576 645 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 MFN2O95140 757 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CXCR1P25024 350 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PEX19P40855 299 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PCBP3P57721 371 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 CSNK2A1P68400 391 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 NET1Q7Z628 596 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 ARMC8Q8IUR7 673 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 DDIT4LQ96D03 193 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 RCN3Q96D15 328 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 LURAP1Q96LR2 239 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 PSD2Q9BQI7 771 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SPATA5L1Q9BVQ7 753 aa12.55□□□□□ -0.4
HLA-DQB1-202ENST00000399079 SLC24A3Q9HC58 644 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms