RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ZNF529Q6P280 563 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 TMEM81Q6P7N7 255 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 CHAC2Q8WUX2 184 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 TCEAL7Q9BRU2 100 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 OR52D1Q9H346 318 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 SRA1Q9HD15 236 aaKnown RBP13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 CENPMQ9NSP4 180 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 ASB6Q9NWX5 421 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 ZMAT5Q9UDW3 170 aaKnown RBP13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 SLC7A7Q9UM01 511 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 MED16Q9Y2X0 877 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 PRELID3BQ9Y3B1 194 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 V9GYH0 126 aa13.61□□□□□ -0.23
RPRD1A-202ENST00000399022 FAM171A2A8MVW0 826 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 CDC40O60508 579 aaKnown RBP eCLIP13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 LUMP51884 338 aaPredicted RBP13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 FAM26EQ8N5C1 309 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 OR9A2Q8NGT5 310 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 SMAP2Q8WU79 429 aaPredicted RBP13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 ACOT11Q8WXI4 607 aaPredicted RBP13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 DCUN1D4Q92564 292 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 TTC9Q92623 222 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 ZNF175Q9Y473 711 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 RHPN2P1A8MT19 583 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 SLCO2B1O94956 709 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 SNRNP70P08621 437 aaKnown RBP13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 NPPBP16860 134 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 FRKP42685 505 aaPredicted RBP13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 TSPAN31Q12999 210 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 LCTLQ6UWM7 567 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 OR8D4Q8NGM9 314 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 LHFPL5Q8TAF8 219 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 NANPQ8TBE9 248 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 CMKLR1Q99788 373 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 MARVELD1Q9BSK0 173 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 SLC6A20Q9NP91 592 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 TNFP01375 233 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 HBQ1P09105 142 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 CCR2P41597 374 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 CCR9P51686 369 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 ACTBP60709 375 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 ACTG1P63261 375 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 KLHL24Q6TFL4 600 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 FAM122BQ7Z309 247 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 C5orf34Q96MH7 638 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 HS6ST2Q96MM7 605 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 WDR92Q96MX6 357 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 POLMQ9NP87 494 aaPredicted RBP13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 GMEB2Q9UKD1 530 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 V9GY05 133 aa13.6□□□□□ -0.23
RPRD1A-202ENST00000399022 TRAV20A0A0B4J274 112 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 GXYLT2A0PJZ3 443 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 PLA2G10O15496 165 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 UBXN2BQ14CS0 331 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 DEFB110Q30KQ9 67 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 HEPHL1Q6MZM0 1159 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 H3F3CQ6NXT2 135 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 MEPCEQ7L2J0 689 aaKnown RBP13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 ACOT4Q8N9L9 421 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 SLC25A36Q96CQ1 311 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 MVB12BQ9H7P6 319 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 CXorf36Q9H7Y0 433 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 REV1Q9UBZ9 1251 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 CAMK2AQ9UQM7 478 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 OR6C65A6NJZ3 312 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 ACOD1A6NK06 481 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 AGAP14A8MT82 685 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 PRKRAO75569 313 aaKnown RBP13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 IFNA21P01568 189 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 C5AR1P21730 350 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 POU4F2Q12837 409 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 TPBGQ13641 420 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 ENPP2Q13822 863 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 ZNF79Q15937 498 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 FAM78AQ5JUQ0 283 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 RPL13AP3Q6NVV1 102 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 ZER1Q7Z7L7 766 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 MMP21Q8N119 569 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 LRRC25Q8N386 305 aaPredicted RBP13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 SLC38A1Q9H2H9 487 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 MYEF2Q9P2K5 600 aaKnown RBP13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 SLC6A5Q9Y345 797 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 ANTXRLA6NF34 631 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 WRBO00258 174 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 EIF1AYO14602 144 aaKnown RBP13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 EIF1AXP47813 144 aaKnown RBP13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 TMEM35AQ53FP2 167 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 VASNQ6EMK4 673 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 SYT9Q86SS6 491 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 NXPE3Q969Y0 559 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 SULT1B1O43704 296 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 ZNF254O75437 659 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 EIF4EP06730 217 aaKnown RBP13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 ZP3P21754 424 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 MRPS10P82664 201 aaKnown RBP13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 GFOD2Q3B7J2 385 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 GLT8D1Q68CQ7 371 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 ZNF585AQ6P3V2 769 aa13.59□□□□□ -0.23
RPRD1A-202ENST00000399022 OR6T1Q8NGN1 323 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms