RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IL20Q9NYY1 176 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 COPZ2Q9P299 210 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 MRTO4Q9UKD2 239 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 HS3ST2Q9Y278 367 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 PCDHGA9Q9Y5G4 932 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 A0A087WV48 116 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 MCRIP1C9JLW8 97 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 STX11O75558 287 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 RPP14O95059 124 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF35P13682 527 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 KLF9Q13886 244 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ETFDHQ16134 617 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 C2orf68Q2NKX9 166 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 RGS7BPQ6MZT1 257 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF793Q6ZN11 406 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 LRRC56Q8IYG6 542 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 NUP43Q8NFH3 380 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 OR8S1Q8NH09 359 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SNX33Q8WV41 574 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 NXPE3Q969Y0 559 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 CNRIP1Q96F85 164 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 CD180Q99467 661 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ZDHHC5Q9C0B5 715 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 FN3KQ9H479 309 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF768Q9H5H4 540 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 POT1Q9NUX5 634 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 TAS2R10Q9NYW0 307 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ENTPD4Q9Y227 616 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 EXOGQ9Y2C4 368 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 PCDHGA5Q9Y5G8 931 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 TRBV2A0A0J9YWF9 115 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 BET1O15155 118 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 CREBL2O60519 120 aaPredicted RBP9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 PPP1R3DO95685 299 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 CTSAP10619 480 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 MAKP20794 623 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 STAT5AP42229 794 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 ANXA11P50995 505 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 MMP15P51511 669 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 YOD1Q5VVQ6 348 aaPredicted RBP9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 TMEM215Q68D42 235 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 TMUB2Q71RG4 321 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 FAM129CQ86XR2 697 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF547Q8IVP9 402 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 DNAAF1Q8NEP3 725 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 TNFAIP8L1Q8WVP5 186 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 RELTQ969Z4 430 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 CAMK1GQ96NX5 476 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 NECAB3Q96P71 396 aaPredicted RBP9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 PINK1Q9BXM7 581 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 HPF1Q9NWY4 346 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 PTTG3PQ9NZH4 202 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 PIPOXQ9P0Z9 390 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC23A2Q9UGH3 650 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 INSL5Q9Y5Q6 135 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 PLXNA3P51805 1871 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 A0A1B0GVT2 93 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 GOSR2O14653 212 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 SUSD5O60279 629 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 TYRP14679 529 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 C4BPBP20851 252 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 ACHEP22303 614 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 EDNRAP25101 427 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 S100A11P31949 105 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 GDI2P50395 445 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 RPS15P62841 145 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 GNA13Q14344 377 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 GPNMBQ14956 572 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 GXYLT1Q4G148 440 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 METTL11BQ5VVY1 283 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 OR4C11Q6IEV9 310 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 C17orf99Q6UX52 265 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 UBE3DQ7Z6J8 389 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 PDZD9Q8IXQ8 264 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 OR4K13Q8NH42 304 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 LRRC46Q96FV0 321 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 ADAT1Q9BUB4 502 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 TAS2R3Q9NYW6 316 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 OR10H1Q9Y4A9 318 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 CNTRLQ7Z7A1 2325 aa9.13□□□□□ -0.95
PTCHD4-202ENST00000398738 PLSCR5A0PG75 271 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 UNC119BA6NIH7 251 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SDC3O75056 442 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 FPR3P25089 353 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 CERS1P27544 350 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SORDQ00796 357 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 LRRN1Q6UXK5 716 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 PAQR7Q86WK9 346 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 LINC00518Q8N0U6 118 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SDR9C7Q8NEX9 313 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 OR6K6Q8NGW6 343 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 CDS1Q92903 461 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF578Q96N58 590 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 CPEB1Q9BZB8 566 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 ACTR6Q9GZN1 396 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 CACYBPQ9HB71 228 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 NOX4Q9NPH5 578 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 HCFC1R1Q9NWW0 138 aa9.12□□□□□ -0.95
PTCHD4-202ENST00000398738 SIDT1Q9NXL6 827 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 769.7 ms