RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ERP29P30040 261 aaKnown RBP13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 CXCR4P61073 352 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 MYBPHQ13203 477 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 AKR1C8PQ5T2L2 129 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 LCN8Q6JVE9 175 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 INTS14Q96SY0 518 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 ARNT2Q9HBZ2 717 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 BTNL2Q9UIR0 455 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF443Q9Y2A4 671 aaPredicted RBP13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 SLC35A3Q9Y2D2 325 aa13.28□□□□□ -0.28
PCDHA11-201ENST00000398640 LOC105369274A0A096LPK9 316 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 A0A1W2PPC4 97 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 FOXE1O00358 373 aaPredicted RBP13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 IL7P13232 177 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 DCTP40126 519 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 CLDN17P56750 224 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 POU3F1Q03052 451 aaPredicted RBP13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 TAZQ16635 292 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 KRBOX4Q5JUW0 171 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 OR4N4Q8N0Y3 316 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 BPIFA2Q96DR5 249 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 CDCP1Q9H5V8 836 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 CARD8Q9Y2G2 431 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 PCDHGA1Q9Y5H4 931 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 A0A0G2JMP0 313 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 C4orf47A7E2U8 309 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 J3KTA2 159 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 SSTR4P31391 388 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 SNRPD2P62316 118 aaKnown RBP13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 SLC22A6Q4U2R8 563 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 C9orf152Q5JTZ5 239 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF704Q6ZNC4 412 aaPredicted RBP13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF687Q8N1G0 1237 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 DTWD1Q8N5C7 304 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 OR4M2Q8NGB6 313 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 IL21Q9HBE4 155 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 ACOT13Q9NPJ3 140 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 ATP13A2Q9NQ11 1180 aa13.27□□□□□ -0.28
PCDHA11-201ENST00000398640 TLCD2A6NGC4 264 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 HSPB6O14558 160 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 SLC43A1O75387 559 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 RFPL3O75679 317 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 SERPINE2P07093 398 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 PCGF2P35227 344 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 HTR3AP46098 478 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 PDE7AQ13946 482 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 ENTPD8Q5MY95 495 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 CTSL3PQ5NE16 218 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 ARFGAP1Q8N6T3 406 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 PHB2Q99623 299 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 RAB9BQ9NP90 201 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 DUSP13Q9UII6 198 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 IGLV3-10A0A075B6K4 115 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 HTR2AP28223 471 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 DLSTP36957 453 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 OR8B8Q15620 311 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 GPR19Q15760 415 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 SLC16A14Q7RTX9 510 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 TSPYL5Q86VY4 417 aaPredicted RBP13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 BPHLQ86WA6 291 aaPredicted RBP13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 OR4K15Q8NH41 348 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 DCUN1D4Q92564 292 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 UBXN10Q96LJ8 280 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 MRPS2Q9Y399 296 aaKnown RBP13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 HSPE1-MOB4S4R3N1 261 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 FAM166BA8MTA8 275 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 PRSS3P35030 304 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 HSD17B7P56937 341 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 DEFB109BQ30KR1 87 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 TMEM196Q5HYL7 178 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 TMEM64Q6YI46 380 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 OR11L1Q8NGX0 322 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 SYNPRQ8TBG9 265 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 POC1BQ8TC44 478 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 DDX31Q9H8H2 851 aaKnown RBP13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 LRFN1Q9P244 771 aa13.27□□□□□ -0.29
PCDHA11-201ENST00000398640 MDFIC2A0A1B0GVS7 189 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 PPP6CO00743 305 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 PLRG1O43660 514 aaKnown RBP13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF780AO75290 641 aaPredicted RBP13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 PTHP01270 115 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 HTR5AP47898 357 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 FGF21Q9NSA1 209 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 DVL2O14641 736 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 F13BP05160 661 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 ARSBP15848 533 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 GPR18Q14330 331 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 OR14A16Q8NHC5 309 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF480Q8WV37 535 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 GAB3Q8WWW8 586 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 PPIL3Q9H2H8 161 aaKnown RBP13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 MBNL1Q9NR56 388 aaKnown RBP13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 LILRB5O75023 590 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 MMP2P08253 660 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 ZDHHC11BP0C7U3 371 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 CPMP14384 443 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 GPR148Q8TDV2 347 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 PDXPQ96GD0 296 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 C4orf36Q96KX1 117 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 WDR83Q9BRX9 315 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms