RNA–Protein interactions for RNA: ENST00000398455.3

HIGD1C-201, Transcript of HIG1 hypoxia inducible domain family member 1C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1C, Length 371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1C-201ENST00000398455 BIVM-ERCC5R4GMW8 1640 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 NPHP4O75161 1426 aaPredicted RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 WRNQ14191 1432 aaPredicted RBP eCLIP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 SNED1Q8TER0 1413 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 IGHV2-70DA0A0C4DH43 119 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 IFITM10A6NMD0 228 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 RNF212BA8MTL3 300 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 PRSS44E7EML9 344 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 WWP2O00308 870 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 ZNF195O14628 629 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 CDC123O75794 336 aaPredicted RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 OR2J3O76001 311 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 CLPXO76031 633 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 NADKO95544 446 aaPredicted RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 YEATS4O95619 227 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 POP4O95707 220 aaKnown RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 AP2A1O95782 977 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 MBP02144 154 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 ATP1A1P05023 1023 aaKnown RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 SERPIND1P05546 499 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 IGFBP1P08833 259 aaPredicted RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 ZNF24P17028 368 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 GCAP28676 217 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 RORAP35398 523 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 MAP3K8P41279 467 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 QARSP47897 775 aaKnown RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 CLDN18P56856 261 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 MAP3K7CLP57077 242 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 PLOD1Q02809 727 aaPredicted RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 ARL16Q0P5N6 197 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 TMEM187Q14656 261 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 LAGE3Q14657 143 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 STK38Q15208 465 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 GTDC1Q4AE62 458 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 VPS26BQ4G0F5 336 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 HSP90AA4PQ58FG1 418 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 PDPK2PQ6A1A2 396 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 TWF2Q6IBS0 349 aaKnown RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 SLC25A25Q6KCM7 469 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 CHMP1BQ7LBR1 199 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 NR2C2APQ86WQ0 139 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 VRK2Q86Y07 508 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 ERI1Q8IV48 349 aaKnown RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 LSMEM2Q8N112 164 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 FAM58AQ8N1B3 248 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 OR4F6Q8NGB9 312 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 OR4D9Q8NGE8 314 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 MAPK15Q8TD08 544 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 SMAP2Q8WU79 429 aaPredicted RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 PCNPQ8WW12 178 aaKnown RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 TM9SF4Q92544 642 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 C8orf44Q96CB5 159 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 DNAJA3Q96EY1 480 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 SERAC1Q96JX3 654 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 CNN2Q99439 309 aaKnown RBP3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 RAB34Q9BZG1 259 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 RACGAP1Q9H0H5 632 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 GLIPR2Q9H4G4 154 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 SYNDIG1Q9H7V2 258 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 NT5DC2Q9H857 520 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 POPDC2Q9HBU9 364 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 PTTG3PQ9NZH4 202 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 LNPEPQ9UIQ6 1025 aa3.31□□□□□ -1.88
HIGD1C-201ENST00000398455 ZC3H13Q5T200 1668 aaKnown RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 ABCC3O15438 1527 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 PDE4DIPQ5VU43 2346 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 A0A1W2PR80 420 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 C12orf71A8MTZ7 269 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 NPIPB9F8W1W9 429 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 FBP2O00757 339 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 RRP8O43159 456 aaKnown RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 TRMUO75648 421 aaKnown RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 AP2A2O94973 939 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 CLPTM1O96005 669 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 CT62P0C5K7 136 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 HMGB2P26583 209 aaKnown RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 RRM2P31350 389 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 CD80P33681 288 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 OPRD1P41143 372 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 UQCRFS1P47985 274 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 DLX5P56178 289 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 SLC8A3P57103 927 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 RAB10P61026 200 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 ERVK-16P61578 105 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 YWHAEP62258 255 aaKnown RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 RPS27AP62979 156 aaKnown RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 KCNJ2P63252 427 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 PPIL2Q13356 520 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 FASTKQ14296 549 aaKnown RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 RBBP5Q15291 538 aaKnown RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 MRPL23Q16540 153 aaKnown RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 NDUFA9Q16795 377 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 ZNF829Q3KNS6 432 aaPredicted RBP3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 KIAA1644Q3SXP7 199 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 TIGITQ495A1 244 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 BEX5Q5H9J7 111 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 CCDC122Q5T0U0 273 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 H3F3CQ6NXT2 135 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 SASS6Q6UVJ0 657 aa3.3□□□□□ -1.88
HIGD1C-201ENST00000398455 RBMS3Q6XE24 437 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms