RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 TMEM117Q9H0C3 514 aa2.57□□□□□ -2
CMC1-202ENST00000396610 VCPKMTQ9H867 229 aa2.57□□□□□ -2
CMC1-202ENST00000396610 SLC25A22Q9H936 323 aa2.57□□□□□ -2
CMC1-202ENST00000396610 PLGRKTQ9HBL7 147 aa2.57□□□□□ -2
CMC1-202ENST00000396610 POLE3Q9NRF9 147 aa2.57□□□□□ -2
CMC1-202ENST00000396610 KIF25Q9UIL4 384 aa2.57□□□□□ -2
CMC1-202ENST00000396610 PHF11Q9UIL8 331 aa2.57□□□□□ -2
CMC1-202ENST00000396610 ERVW-1Q9UQF0 538 aa2.57□□□□□ -2
CMC1-202ENST00000396610 RASD1Q9Y272 281 aa2.57□□□□□ -2
CMC1-202ENST00000396610 ASF1AQ9Y294 204 aa2.57□□□□□ -2
CMC1-202ENST00000396610 ATP10DQ9P241 1426 aa2.57□□□□□ -2
CMC1-202ENST00000396610 FAM166BA8MTA8 275 aa2.56□□□□□ -2
CMC1-202ENST00000396610 FAM189A1O60320 539 aa2.56□□□□□ -2
CMC1-202ENST00000396610 MFN2O95140 757 aa2.56□□□□□ -2
CMC1-202ENST00000396610 MMP1P03956 469 aa2.56□□□□□ -2
CMC1-202ENST00000396610 EPB41P11171 864 aaKnown RBP2.56□□□□□ -2
CMC1-202ENST00000396610 PAX7P23759 505 aa2.56□□□□□ -2
CMC1-202ENST00000396610 YWHABP31946 246 aaKnown RBP2.56□□□□□ -2
CMC1-202ENST00000396610 CA8P35219 290 aa2.56□□□□□ -2
CMC1-202ENST00000396610 DAP3P51398 398 aaKnown RBP2.56□□□□□ -2
CMC1-202ENST00000396610 MAP2K1Q02750 393 aaPredicted RBP2.56□□□□□ -2
CMC1-202ENST00000396610 GPNMBQ14956 572 aa2.56□□□□□ -2
CMC1-202ENST00000396610 TP53I3Q53FA7 332 aa2.56□□□□□ -2
CMC1-202ENST00000396610 C1orf100Q5SVJ3 147 aa2.56□□□□□ -2
CMC1-202ENST00000396610 CASC10Q5T4H9 136 aa2.56□□□□□ -2
CMC1-202ENST00000396610 NCR3LG1Q68D85 454 aa2.56□□□□□ -2
CMC1-202ENST00000396610 BLOC1S2Q6QNY1 142 aa2.56□□□□□ -2
CMC1-202ENST00000396610 IGFL3Q6UXB1 125 aa2.56□□□□□ -2
CMC1-202ENST00000396610 SYT10Q6XYQ8 523 aa2.56□□□□□ -2
CMC1-202ENST00000396610 MOB3BQ86TA1 216 aa2.56□□□□□ -2
CMC1-202ENST00000396610 PNKDQ8N490 385 aa2.56□□□□□ -2
CMC1-202ENST00000396610 GPATCH11Q8N954 259 aa2.56□□□□□ -2
CMC1-202ENST00000396610 OR10A7Q8NGE5 316 aa2.56□□□□□ -2
CMC1-202ENST00000396610 OR10T2Q8NGX3 314 aa2.56□□□□□ -2
CMC1-202ENST00000396610 ST8SIA1Q92185 356 aa2.56□□□□□ -2
CMC1-202ENST00000396610 MRPS31Q92665 395 aaKnown RBP2.56□□□□□ -2
CMC1-202ENST00000396610 KCNA7Q96RP8 456 aa2.56□□□□□ -2
CMC1-202ENST00000396610 RASL11BQ9BPW5 248 aa2.56□□□□□ -2
CMC1-202ENST00000396610 EDEM2Q9BV94 578 aa2.56□□□□□ -2
CMC1-202ENST00000396610 SLC17A5Q9NRA2 495 aa2.56□□□□□ -2
CMC1-202ENST00000396610 NUDT15Q9NV35 164 aa2.56□□□□□ -2
CMC1-202ENST00000396610 AATFQ9NY61 560 aaKnown RBP eCLIP2.56□□□□□ -2
CMC1-202ENST00000396610 CHRNA9Q9UGM1 479 aa2.56□□□□□ -2
CMC1-202ENST00000396610 ZNF223Q9UK11 482 aaPredicted RBP2.56□□□□□ -2
CMC1-202ENST00000396610 IGLV3-16A0A075B6K0 115 aa2.55□□□□□ -2
CMC1-202ENST00000396610 IGKV1D-8A0A087WSZ0 117 aa2.55□□□□□ -2
CMC1-202ENST00000396610 IGHV1OR21-1A0A087WYE8 117 aa2.55□□□□□ -2
CMC1-202ENST00000396610 A0A1B0GUS0 222 aa2.55□□□□□ -2
CMC1-202ENST00000396610 A0A1W2PNV4 684 aa2.55□□□□□ -2
CMC1-202ENST00000396610 A6NIZ1 184 aa2.55□□□□□ -2
CMC1-202ENST00000396610 TRDCB7Z8K6 153 aa2.55□□□□□ -2
CMC1-202ENST00000396610 RS1O15537 224 aa2.55□□□□□ -2
CMC1-202ENST00000396610 OR10H3O60404 316 aa2.55□□□□□ -2
CMC1-202ENST00000396610 B3GALNT1O75752 331 aa2.55□□□□□ -2
CMC1-202ENST00000396610 MOSP00540 346 aa2.55□□□□□ -2
CMC1-202ENST00000396610 ALOX5P09917 674 aa2.55□□□□□ -2
CMC1-202ENST00000396610 UQCRC2P22695 453 aa2.55□□□□□ -2
CMC1-202ENST00000396610 SHMT2P34897 504 aa2.55□□□□□ -2
CMC1-202ENST00000396610 PTGDSP41222 190 aa2.55□□□□□ -2
CMC1-202ENST00000396610 SH3BGRP55822 239 aaPredicted RBP2.55□□□□□ -2
CMC1-202ENST00000396610 RAP1BP61224 184 aa2.55□□□□□ -2
CMC1-202ENST00000396610 RPS14P62263 151 aaKnown RBP2.55□□□□□ -2
CMC1-202ENST00000396610 TGFBR3Q03167 851 aa2.55□□□□□ -2
CMC1-202ENST00000396610 ZNF763Q0D2J5 394 aa2.55□□□□□ -2
CMC1-202ENST00000396610 SLC25A52Q3SY17 297 aa2.55□□□□□ -2
CMC1-202ENST00000396610 RIPPLY2Q5TAB7 128 aa2.55□□□□□ -2
CMC1-202ENST00000396610 PYHIN1Q6K0P9 492 aa2.55□□□□□ -2
CMC1-202ENST00000396610 ZNF429Q86V71 674 aa2.55□□□□□ -2
CMC1-202ENST00000396610 RDH10Q8IZV5 341 aa2.55□□□□□ -2
CMC1-202ENST00000396610 CATSPER1Q8NEC5 780 aa2.55□□□□□ -2
CMC1-202ENST00000396610 OR51S1Q8NGJ8 323 aa2.55□□□□□ -2
CMC1-202ENST00000396610 PIGCQ92535 297 aa2.55□□□□□ -2
CMC1-202ENST00000396610 CCNL2Q96S94 520 aaPredicted RBP2.55□□□□□ -2
CMC1-202ENST00000396610 ZNF670Q9BS34 389 aa2.55□□□□□ -2
CMC1-202ENST00000396610 THUMPD2Q9BTF0 503 aaKnown RBP2.55□□□□□ -2
CMC1-202ENST00000396610 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
CMC1-202ENST00000396610 SMYD3Q9H7B4 428 aa2.55□□□□□ -2
CMC1-202ENST00000396610 ELOVL3Q9HB03 270 aa2.55□□□□□ -2
CMC1-202ENST00000396610 HPF1Q9NWY4 346 aa2.55□□□□□ -2
CMC1-202ENST00000396610 C6orf203Q9P0P8 240 aaPredicted RBP2.55□□□□□ -2
CMC1-202ENST00000396610 PRPF19Q9UMS4 504 aaKnown RBP2.55□□□□□ -2
CMC1-202ENST00000396610 CDC42BPBQ9Y5S2 1711 aa2.55□□□□□ -2
CMC1-202ENST00000396610 V9GY05 133 aa2.55□□□□□ -2
CMC1-202ENST00000396610 MYO10Q9HD67 2058 aa2.54□□□□□ -2
CMC1-202ENST00000396610 A8MUI8 341 aa2.54□□□□□ -2
CMC1-202ENST00000396610 E9PBE3 544 aa2.54□□□□□ -2
CMC1-202ENST00000396610 NPIPA7E9PJI5 369 aa2.54□□□□□ -2
CMC1-202ENST00000396610 KRTAP4-16G5E9R7 235 aaPredicted RBP2.54□□□□□ -2
CMC1-202ENST00000396610 TAPBPO15533 448 aa2.54□□□□□ -2
CMC1-202ENST00000396610 CXCL13O43927 109 aa2.54□□□□□ -2
CMC1-202ENST00000396610 DFNA5O60443 496 aa2.54□□□□□ -2
CMC1-202ENST00000396610 BCAS1O75363 584 aaPredicted RBP2.54□□□□□ -2
CMC1-202ENST00000396610 TNFSF13O75888 250 aa2.54□□□□□ -2
CMC1-202ENST00000396610 P04436 131 aa2.54□□□□□ -2
CMC1-202ENST00000396610 LGALS2P05162 132 aa2.54□□□□□ -2
CMC1-202ENST00000396610 NPIPA8P0DM63 369 aa2.54□□□□□ -2
CMC1-202ENST00000396610 POLR2EP19388 210 aaKnown RBP2.54□□□□□ -2
CMC1-202ENST00000396610 DRD5P21918 477 aa2.54□□□□□ -2
CMC1-202ENST00000396610 ANXA13P27216 316 aa2.54□□□□□ -2
CMC1-202ENST00000396610 HNRNPA3P51991 378 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms