RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CTSFQ9UBX1 484 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 KLHL21Q9UJP4 597 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 PILRBQ9UKJ0 227 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 YARS2Q9Y2Z4 477 aaKnown RBP13.7□□□□□ -0.22
CBX3-202ENST00000396386 ZNF337Q9Y3M9 751 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 HEATR5AQ86XA9 2040 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.7□□□□□ -0.22
CBX3-202ENST00000396386 HTR3EA5X5Y0 456 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 OR6C76A6NM76 312 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 ICOSLGO75144 302 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 REM1O75628 298 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 SLC2A5P22732 501 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 ETV6P41212 452 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 IFITM3Q01628 133 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 RHBDD2Q6NTF9 364 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 COX15Q7KZN9 410 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 TMPRSS9Q7Z410 1059 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 TMEM99Q8N816 258 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 ZFP41Q8N8Y5 198 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 OR1N1Q8NGS0 311 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 SAP25Q8TEE9 199 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 C1GALT1C1Q96EU7 318 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 KCTD7Q96MP8 289 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 ERMAPQ96PL5 475 aaPredicted RBP13.7□□□□□ -0.22
CBX3-202ENST00000396386 ADOQ96SZ5 270 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 KCNS3Q9BQ31 491 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 ALG8Q9BVK2 526 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 OR51V1Q9H2C8 321 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 CHRNA9Q9UGM1 479 aa13.7□□□□□ -0.22
CBX3-202ENST00000396386 UNC13CQ8NB66 2214 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 RP1P56715 2156 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 ASXL3Q9C0F0 2248 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 LY6G6EA0A0G2JKS1 128 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 TO15178 435 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 YKT6O15498 198 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 UPK1BO75841 260 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 CDRT1O95170 752 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 LALBAP00709 142 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 IGF2P01344 180 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 TDGF1P13385 188 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 SLC6A8P48029 635 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 SLC16A1P53985 500 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 BDH1Q02338 343 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 RUNX1T1Q06455 604 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 PLCXD2Q0VAA5 305 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 CRTC2Q53ET0 693 aaPredicted RBP13.69□□□□□ -0.22
CBX3-202ENST00000396386 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 B3GLCTQ6Y288 498 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 ATG4DQ86TL0 474 aaPredicted RBP13.69□□□□□ -0.22
CBX3-202ENST00000396386 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 PLPP5Q8NEB5 264 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 OR5M3Q8NGP4 307 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 PTP4A1Q93096 173 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 CEP19Q96LK0 163 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 TMEM43Q9BTV4 400 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 BARHL1Q9BZE3 327 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 GSTK1Q9Y2Q3 226 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 U3KQA8 63 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 CACNA1EQ15878 2313 aa13.69□□□□□ -0.22
CBX3-202ENST00000396386 IGKV1D-42A0A075B6H8 117 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 DAPL1A0PJW8 107 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 MCIDASD6RGH6 385 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 SIGLEC6O43699 453 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 FGF9P31371 208 aaPredicted RBP13.68□□□□□ -0.22
CBX3-202ENST00000396386 NR0B1P51843 470 aaKnown RBP13.68□□□□□ -0.22
CBX3-202ENST00000396386 POU4F2Q12837 409 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 OXA1LQ15070 435 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 ZNF181Q2M3W8 571 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 HLA-BQ31612 363 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 ZNF362Q5T0B9 420 aaPredicted RBP13.68□□□□□ -0.22
CBX3-202ENST00000396386 CD200R1LQ6Q8B3 271 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 APOOLQ6UXV4 268 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 ZNF574Q6ZN55 896 aaPredicted RBP13.68□□□□□ -0.22
CBX3-202ENST00000396386 LANCL3Q6ZV70 420 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 KLBQ86Z14 1044 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 CYB561A3Q8NBI2 242 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 FAM98AQ8NCA5 519 aaKnown RBP13.68□□□□□ -0.22
CBX3-202ENST00000396386 ATP6V1C2Q8NEY4 427 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 OR10H4Q8NGA5 316 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 OR4D9Q8NGE8 314 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 SLC25A46Q96AG3 418 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 TEAD3Q99594 435 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 TM9SF2Q99805 663 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 COQ7Q99807 217 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 MED18Q9BUE0 208 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 TGIF2Q9GZN2 237 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 NRSN2Q9GZP1 204 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 LAT2Q9GZY6 243 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 SYNDIG1Q9H7V2 258 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 FSCN3Q9NQT6 498 aa13.68□□□□□ -0.22
CBX3-202ENST00000396386 ARID1BQ8NFD5 2236 aaPredicted RBP13.68□□□□□ -0.22
CBX3-202ENST00000396386 IQCMA0A1B0GVH7 501 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 TRDV1A0A1B0GX56 115 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 LRRN3E7EW58 273 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 TSPAN2O60636 221 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 PDGFBP01127 241 aaPredicted RBP13.67□□□□□ -0.22
CBX3-202ENST00000396386 RPL4P36578 427 aaKnown RBP13.67□□□□□ -0.22
CBX3-202ENST00000396386 RPS4XP62701 263 aaKnown RBP13.67□□□□□ -0.22
CBX3-202ENST00000396386 ACTC1P68032 377 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 ACTA1P68133 377 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms