RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 POM121Q96HA1 1249 aa16.21■□□□□ 0.19
FXN-203ENST00000396366 C18orf12Q96KH6 178 aa16.21■□□□□ 0.19
FXN-203ENST00000396366 MTHFD2LQ9H903 347 aaPredicted RBP16.21■□□□□ 0.19
FXN-203ENST00000396366 RLIMQ9NVW2 624 aa16.21■□□□□ 0.19
FXN-203ENST00000396366 ZNF716A6NP11 495 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 ZNF724A8MTY0 619 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 ARHGEF9O43307 516 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 IGHV3-9P01782 118 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 ETFAP13804 333 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 RPS4Y1P22090 263 aaKnown RBP16.2■□□□□ 0.18
FXN-203ENST00000396366 NR1H2P55055 460 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 CSNK2A1P68400 391 aaPredicted RBP16.2■□□□□ 0.18
FXN-203ENST00000396366 CAPRIN1Q14444 709 aaKnown RBP16.2■□□□□ 0.18
FXN-203ENST00000396366 P2RY6Q15077 328 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 SEZ6L2Q6UXD5 910 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 Q6ZT83 130 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 BHLHA15Q7RTS1 189 aaPredicted RBP16.2■□□□□ 0.18
FXN-203ENST00000396366 GALNT5Q7Z7M9 940 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 CCDC103Q8IW40 242 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 SLC25A43Q8WUT9 341 aaPredicted RBP16.2■□□□□ 0.18
FXN-203ENST00000396366 WDR60Q8WVS4 1066 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 AKAP1Q92667 903 aaKnown RBP eCLIP16.2■□□□□ 0.18
FXN-203ENST00000396366 NEUROG1Q92886 237 aa16.2■□□□□ 0.18
FXN-203ENST00000396366 AURKBQ96GD4 344 aaPredicted RBP16.2■□□□□ 0.18
FXN-203ENST00000396366 TACO1Q9BSH4 297 aaKnown RBP16.2■□□□□ 0.18
FXN-203ENST00000396366 SDR39U1Q9NRG7 319 aaPredicted RBP16.2■□□□□ 0.18
FXN-203ENST00000396366 TMED7-TICAM2A0A0A6YYA0 188 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 TMEM72A0PK05 275 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 UBDO15205 165 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 KRT75O95678 551 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 INHBBP09529 407 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 IL7RP16871 459 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 IGHV1-2P23083 117 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 TACR3P29371 465 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 CRATP43155 626 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 OR2B6P58173 313 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 LRRC74AQ0VAA2 488 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 GSTA3Q16772 222 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 MRPL2Q5T653 305 aaKnown RBP16.19■□□□□ 0.18
FXN-203ENST00000396366 ABLIM2Q6H8Q1 611 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 YTHDF3Q7Z739 585 aaKnown RBP16.19■□□□□ 0.18
FXN-203ENST00000396366 VRK2Q86Y07 508 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 ZNF100Q8IYN0 542 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 HSD17B8Q92506 261 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 Q96MF0 132 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 ZIM2Q9NZV7 527 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 OSGIN1Q9UJX0 560 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 TMED7Q9Y3B3 224 aa16.19■□□□□ 0.18
FXN-203ENST00000396366 SPIN1Q9Y657 262 aaPredicted RBP16.19■□□□□ 0.18
FXN-203ENST00000396366 ZANQ9Y493 2812 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 USF3Q68DE3 2245 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 IGKV3D-15A0A087WSY6 115 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 ZC3H12DA2A288 527 aaKnown RBP16.18■□□□□ 0.18
FXN-203ENST00000396366 DPRXA6NFQ7 191 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 TRIM64A6NGJ6 449 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 TRIM64BA6NI03 449 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 HS3ST1O14792 307 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 KLF11O14901 512 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 CLOCKO15516 846 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 ANP32DO95626 131 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 PMS2P2O95744 297 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 DBIP07108 87 aaKnown RBP16.18■□□□□ 0.18
FXN-203ENST00000396366 TFPTP0C1Z6 253 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 GKN3PP0CG01 181 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 IMPDH2P12268 514 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 PTH2RP49190 550 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 ANXA11P50995 505 aaKnown RBP16.18■□□□□ 0.18
FXN-203ENST00000396366 POLR2JP52435 117 aaKnown RBP16.18■□□□□ 0.18
FXN-203ENST00000396366 STK11Q15831 433 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 RPS26P11Q5JNZ5 115 aaPredicted RBP16.18■□□□□ 0.18
FXN-203ENST00000396366 NCMAPQ5T1S8 102 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 EPGNQ6UW88 154 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 ZNF836Q6ZNA1 936 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 CMIPQ8IY22 773 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 SLC38A5Q8WUX1 472 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 TPT1P8Q9HAU6 139 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 HDGFL3Q9Y3E1 203 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 USH1CQ9Y6N9 552 aa16.18■□□□□ 0.18
FXN-203ENST00000396366 CFAP73A6NFT4 308 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 H7C1Q1 480 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 NUDT7P0C024 238 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 ZCCHC18P0CG32 403 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 ADSLP30566 484 aaPredicted RBP16.17■□□□□ 0.18
FXN-203ENST00000396366 SLC1A3P43003 542 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 POLR2HP52434 150 aaKnown RBP16.17■□□□□ 0.18
FXN-203ENST00000396366 FOXG1P55316 489 aaPredicted RBP16.17■□□□□ 0.18
FXN-203ENST00000396366 TXNL4AP83876 142 aaKnown RBP16.17■□□□□ 0.18
FXN-203ENST00000396366 EPS8Q12929 822 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 SLC2A7Q6PXP3 512 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 BIVMQ86UB2 503 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 ZNF611Q8N823 705 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 OR52P1PQ8NH57 321 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 ITCHQ96J02 903 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 SLCO1B3Q9NPD5 702 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 TMEM181Q9P2C4 612 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 LAMP3Q9UQV4 416 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 NOSIPQ9Y314 301 aaKnown RBP16.17■□□□□ 0.18
FXN-203ENST00000396366 CHST2Q9Y4C5 530 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 RNF115Q9Y4L5 304 aa16.17■□□□□ 0.18
FXN-203ENST00000396366 CADP27708 2225 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms