RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ADAM18Q9Y3Q7 739 aa14.96□□□□□ -0.01
PCDH1-203ENST00000394536 NAT1P18440 290 aa14.96□□□□□ -0.02
PCDH1-203ENST00000394536 MAKP20794 623 aa14.96□□□□□ -0.02
PCDH1-203ENST00000394536 RBMS1P29558 406 aaKnown RBP14.96□□□□□ -0.02
PCDH1-203ENST00000394536 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.02
PCDH1-203ENST00000394536 DEFA5Q01523 94 aa14.96□□□□□ -0.02
PCDH1-203ENST00000394536 YIF1BQ5BJH7 314 aa14.96□□□□□ -0.02
PCDH1-203ENST00000394536 OR52R1Q8NGF1 315 aa14.96□□□□□ -0.02
PCDH1-203ENST00000394536 OR5J2Q8NH18 312 aa14.96□□□□□ -0.02
PCDH1-203ENST00000394536 SERGEFQ9UGK8 458 aa14.96□□□□□ -0.02
PCDH1-203ENST00000394536 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.96□□□□□ -0.02
PCDH1-203ENST00000394536 A0A1B0GWA3 101 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 PTHLHP12272 177 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 C5AR1P21730 350 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 MAGEB1P43366 347 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 OTPQ5XKR4 325 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 LINC00615Q96LM1 132 aaPredicted RBP14.95□□□□□ -0.02
PCDH1-203ENST00000394536 SEC22CQ9BRL7 303 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 HCAR1Q9BXC0 346 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 OR8D2Q9GZM6 311 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 PITHD1Q9GZP4 211 aaPredicted RBP14.95□□□□□ -0.02
PCDH1-203ENST00000394536 RNF32Q9H0A6 362 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 TMEM168Q9H0V1 697 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 NOX4Q9NPH5 578 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 GLTPQ9NZD2 209 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 COPZ2Q9P299 210 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 TBC1D29Q9UFV1 150 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 MCIDASD6RGH6 385 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 CREBL2O60519 120 aaPredicted RBP14.95□□□□□ -0.02
PCDH1-203ENST00000394536 ADH1BP00325 375 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 OR8G3PP0DMU2 310 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 GTF2F2P13984 249 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 PRKACBP22694 351 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 SIRPAP78324 504 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 AADACL4Q5VUY2 407 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 C17orf47Q8NEP4 570 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 DHRS1Q96LJ7 313 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 DGAT2Q96PD7 388 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 ACTR6Q9GZN1 396 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 POM121BA6NF01 834 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 SLC22A5O76082 557 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 PDGFAP04085 211 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 PTH2RP49190 550 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 DOC2BQ14184 412 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 TMEM52BQ4KMG9 183 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 GPR155Q7Z3F1 870 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 SPPL3Q8TCT6 385 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 TOX2Q96NM4 488 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 ZFYVE21Q9BQ24 234 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 SLC6A20Q9NP91 592 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.95□□□□□ -0.02
PCDH1-203ENST00000394536 KLHL9Q9P2J3 617 aa14.95□□□□□ -0.02
PCDH1-203ENST00000394536 PATJQ8NI35 1801 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 CIB4A0PJX0 185 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 KDM4EB2RXH2 506 aaPredicted RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 MYOGP15173 224 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 MAP3K8P41279 467 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 ACTA2P62736 377 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 ACTG2P63267 376 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 GALEQ14376 348 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 ZNF680Q8NEM1 530 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 PATE1Q8WXA2 126 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 OR2M2Q96R28 347 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 LMF1Q96S06 567 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 AUNIPQ9H7T9 357 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 MED11Q9P086 117 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 DICER1Q9UPY3 1922 aaKnown RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 H0YGG7 62 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 H7C1C5 153 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 PLGP00747 810 aaPredicted RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 F13BP05160 661 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 RPS27P42677 84 aaKnown RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 CTXN1P60606 82 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 ARF3P61204 181 aaPredicted RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 LCN6P62502 163 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 THSD4Q6ZMP0 1018 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 TCTE3Q8IZS6 198 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 JAGN1Q8N5M9 183 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 TOR1AIP2Q8NFQ8 470 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 SYNPRQ8TBG9 265 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 RIT1Q92963 219 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 MAP6Q96JE9 813 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 DERL3Q96Q80 235 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 SERINC2Q96SA4 455 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 DDOQ99489 341 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 NOX3Q9HBY0 568 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 RXFP3Q9NSD7 469 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 GRHPRQ9UBQ7 328 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 DSPPQ9NZW4 1301 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 A0A0A6YYC8 382 aaPredicted RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 OR2W5A6NFC9 320 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 OTOL1A6NHN0 477 aaPredicted RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 I3L1I5 382 aaPredicted RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 SCO2O43819 266 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 UBL3O95164 117 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 UCHL1P09936 223 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 TNFRSF17Q02223 184 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 SQSTM1Q13501 440 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 MLF2Q15773 248 aaPredicted RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 ALKAL2Q6UX46 152 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms