RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MEX3AA1L020 520 aaKnown RBP17.47■□□□□ 0.39
HOXC6-202ENST00000394331 GSAPA4D1B5 854 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 SURF4O15260 269 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 FAM71E1Q6IPT2 247 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 NXPE4Q6UWF7 544 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 RTL10Q7L3V2 364 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 TRAPPC5Q8IUR0 188 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 ZNF285Q96NJ3 590 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 ZNF607Q96SK3 696 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 TEX12Q9BXU0 123 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 ICKQ9UPZ9 632 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 CKAP5Q14008 2032 aa17.47■□□□□ 0.39
HOXC6-202ENST00000394331 BCHEP06276 602 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 PAICSP22234 425 aaKnown RBP17.46■□□□□ 0.39
HOXC6-202ENST00000394331 IFNGR2P38484 337 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 H2BFSP57053 126 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 TAS2R43P59537 309 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 TEX30Q5JUR7 227 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 MANEAQ5SRI9 462 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 TMEM185AQ8NFB2 350 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 WFIKKN2Q8TEU8 576 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 NEURL3Q96EH8 262 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 ISG20L2Q9H9L3 353 aaKnown RBP17.46■□□□□ 0.39
HOXC6-202ENST00000394331 KLHL9Q9P2J3 617 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 IMPA2O14732 288 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 GBAP04062 536 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 SDHBP21912 280 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 PTAFRP25105 342 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 MRPS10P82664 201 aaKnown RBP17.46■□□□□ 0.39
HOXC6-202ENST00000394331 TSPAN31Q12999 210 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 PIN1Q13526 163 aaPredicted RBP17.46■□□□□ 0.39
HOXC6-202ENST00000394331 FAM109BQ6ICB4 259 aaPredicted RBP17.46■□□□□ 0.39
HOXC6-202ENST00000394331 CEACAM19Q7Z692 300 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 ABHD4Q8TB40 342 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 THAP6Q8TBB0 222 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 RXFP4Q8TDU9 374 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 ZNF514Q96K75 400 aaPredicted RBP17.46■□□□□ 0.39
HOXC6-202ENST00000394331 OR2AG1Q9H205 316 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 SDHAF3Q9NRP4 125 aa17.46■□□□□ 0.39
HOXC6-202ENST00000394331 ANKRD20A5PA0PJZ0 165 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 RFPL4AA6NLU0 287 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF729A6NN14 1252 aaPredicted RBP17.45■□□□□ 0.38
HOXC6-202ENST00000394331 RFPL4AL1F8VTS6 287 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 LILRB5O75023 590 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 PRNPP04156 253 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 SOAT1P35610 550 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 TAS2R50P59544 299 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 MC1RQ01726 317 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 MELKQ14680 651 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 C3orf33Q6P1S2 294 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 APOOLQ6UXV4 268 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 ACBD7Q8N6N7 88 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 VN1R2Q8NFZ6 395 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 OR5W2Q8NH69 310 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 C2CD4CQ8TF44 421 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 TMEM41AQ96HV5 264 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 INPP5EQ9NRR6 644 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 SH2B3Q9UQQ2 575 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 NUDT19A8MXV4 375 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 LINC00271P0C7V0 271 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 EPXP11678 715 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 ADCYAP1P18509 176 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 ATF1P18846 271 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 NOS3P29474 1203 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF765Q7L2R6 523 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 PRRC1Q96M27 445 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 TIMP4Q99727 224 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 TMEM121BQ9BXQ6 578 aaPredicted RBP17.45■□□□□ 0.38
HOXC6-202ENST00000394331 FAM117AQ9C073 453 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 SLC22A7Q9Y694 548 aa17.45■□□□□ 0.38
HOXC6-202ENST00000394331 C17orf113A0A1B0GUU1 675 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 LRRC72A6NJI9 287 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 SAP18O00422 153 aaKnown RBP17.44■□□□□ 0.38
HOXC6-202ENST00000394331 TIMP1P01033 207 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 SELLP14151 372 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 ART1P52961 327 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 PRSS45Q7RTY3 260 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 DNAAF1Q8NEP3 725 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 LINC00615Q96LM1 132 aaPredicted RBP17.44■□□□□ 0.38
HOXC6-202ENST00000394331 ALG8Q9BVK2 526 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 PCDHGA5Q9Y5G8 931 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 HIDE1A8MVS5 230 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 TMEM127O75204 238 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 KRT33AO76009 404 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 ACRP10323 421 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 ANXA7P20073 488 aaKnown RBP17.44■□□□□ 0.38
HOXC6-202ENST00000394331 AGTR1P30556 359 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 MNDAP41218 407 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 GPR1P46091 355 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF345Q14585 488 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 FAM27D1Q5T7N8 215 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 OR7E24Q6IFN5 339 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 MRPL43Q8N983 215 aaKnown RBP17.44■□□□□ 0.38
HOXC6-202ENST00000394331 BRIX1Q8TDN6 353 aaKnown RBP17.44■□□□□ 0.38
HOXC6-202ENST00000394331 PIGKQ92643 395 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 DPEP2Q9H4A9 486 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 KLK1P06870 262 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 CISD3P0C7P0 127 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF35P13682 527 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 SNRPBP14678 240 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms