RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CLECL1Q8IZS7 167 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 KIRREL3Q8IZU9 778 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 VPS37AQ8NEZ2 397 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 OR10H5Q8NGA6 315 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 OR2W6PQ8NHA6 318 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 APH1AQ96BI3 265 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 TESCQ96BS2 214 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 ZNF775Q96BV0 537 aaPredicted RBP15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 DHRS9Q9BPW9 319 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 RHNO1Q9BSD3 238 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 OR51I1Q9H343 314 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 CBLN4Q9NTU7 201 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 ASB6Q9NWX5 421 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 GDF2Q9UK05 429 aaPredicted RBP15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 NOSIPQ9Y314 301 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 WDR45Q9Y484 360 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 SLC25A15Q9Y619 301 aa15.41■□□□□ 0.06
SNRPA1-202ENST00000394082 TYROBPO43914 113 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 NDUFS7O75251 213 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 SPAG7O75391 227 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 DHRS4L1P0CG22 281 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 HTR3AP46098 478 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 TXNL4AP83876 142 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 MAPK14Q16539 360 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 DPY19L1Q2PZI1 675 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 SAXO2Q658L1 398 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 CMIPQ8IY22 773 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 AMBRA1Q9C0C7 1298 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 CTPS2Q9NRF8 586 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 PLCE1Q9P212 2302 aa15.4■□□□□ 0.06
SNRPA1-202ENST00000394082 A0A096LNT2 108 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 CIB4A0PJX0 185 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 ELOA3DA6NLF2 546 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 E7EQL1 145 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 H7C417 338 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 PDLIM1O00151 329 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 EIF1BO60739 113 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 MRPL33O75394 65 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 CD40P25942 277 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 KCNJ10P78508 379 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 ELOA3BQ3SY89 546 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 HMBOX1Q6NT76 420 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 ZNF544Q6NX49 715 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 EMBQ6PCB8 327 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 FRRS1Q6ZNA5 592 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 ADGRG3Q86Y34 549 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 DEPDC4Q8N2C3 294 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 UBE2J2Q8N2K1 259 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 C17orf78Q8N4C9 275 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 C1orf162Q8NEQ5 155 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 ELOA3Q8NG57 546 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 OR4A15Q8NGL6 344 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 ZNF563Q8TA94 476 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 XAGE5Q8WWM1 108 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 PMM1Q92871 262 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 ROPN1LQ96C74 230 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 NEURL3Q96EH8 262 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 ARL5BQ96KC2 179 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 AKTIPQ9H8T0 292 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 PARPBPQ9NWS1 579 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 DCTN4Q9UJW0 460 aa15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-202ENST00000394082 A8MV72 311 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 FAAHO00519 579 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 ZNF208O43345 1280 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 SSX4O60224 188 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 RAD51DO75771 328 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 MYZAPP0CAP1 466 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 OR12D1P0DN82 309 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 TFPIP10646 304 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 NTF4P34130 210 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 MAGEA8P43361 318 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 NUDT6P53370 316 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 IRX1P78414 480 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 LOXL1Q08397 574 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 IFFO1Q0D2I5 559 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 FUT5Q11128 374 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 CASP8Q14790 479 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 GABRA6Q16445 453 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 SLC22A25Q6T423 547 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 NUDCD3Q8IVD9 361 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 FBXL14Q8N1E6 418 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 CLEC4FQ8N1N0 589 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 PIAS4Q8N2W9 510 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 MUC15Q8N387 334 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 ARFGAP2Q8N6H7 521 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 BOD1Q96IK1 185 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 TMEM109Q9BVC6 243 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 CACNG6Q9BXT2 260 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 DPY30Q9C005 99 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 YAE1D1Q9NRH1 226 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 TMEM160Q9NX00 188 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 TMEM181Q9P2C4 612 aa15.38■□□□□ 0.05
SNRPA1-202ENST00000394082 CCT8L1PA6NM43 557 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 BIRC5O15392 142 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 SERPINE1P05121 402 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 BMP4P12644 408 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 SLC25A16P16260 332 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms