RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 FOSL2P15408 326 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 HOXB9P17482 250 aaPredicted RBP9.77□□□□□ -0.84
CALD1-203ENST00000393118 PRKAR1BP31321 381 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 RABIFP47224 123 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 SMCO1Q147U7 214 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 C1orf94Q6P1W5 598 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 COMMD2Q86X83 199 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 MCATQ8IVS2 390 aaKnown RBP9.77□□□□□ -0.84
CALD1-203ENST00000393118 CNOT9Q92600 299 aaKnown RBP9.77□□□□□ -0.84
CALD1-203ENST00000393118 TNFRSF13CQ96RJ3 184 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 TRAF4Q9BUZ4 470 aaPredicted RBP9.77□□□□□ -0.84
CALD1-203ENST00000393118 TBL1XR1Q9BZK7 514 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 BCL2L10Q9HD36 194 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 CYB5R1Q9UHQ9 305 aa9.77□□□□□ -0.84
CALD1-203ENST00000393118 HCRTR2O43614 444 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 PLRG1O43660 514 aaKnown RBP9.77□□□□□ -0.85
CALD1-203ENST00000393118 CTSVO60911 334 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 TFPIP10646 304 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 PVALBP20472 110 aaPredicted RBP9.77□□□□□ -0.85
CALD1-203ENST00000393118 CRMP1Q14194 572 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 AGERQ15109 404 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 YIF1BQ5BJH7 314 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 LINC00299Q6ZSB3 139 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 ZNF550Q7Z398 422 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 C4orf36Q96KX1 117 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 ADAD1Q96M93 576 aaKnown RBP9.77□□□□□ -0.85
CALD1-203ENST00000393118 TCEAL2Q9H3H9 227 aaPredicted RBP9.77□□□□□ -0.85
CALD1-203ENST00000393118 PIGUQ9H490 435 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 C14orf105Q9NVL8 296 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 FNDC1Q4ZHG4 1894 aaPredicted RBP9.77□□□□□ -0.85
CALD1-203ENST00000393118 IGKV1-8A0A0C4DH67 115 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 TRBV2A0A0J9YWF9 115 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 LEUTXA8MZ59 168 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 RGS9O75916 674 aaPredicted RBP9.77□□□□□ -0.85
CALD1-203ENST00000393118 COL9A1P20849 921 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 OR12D2P58182 307 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 ALG11Q2TAA5 492 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 NDUFAF6Q330K2 333 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 ZNF676Q8N7Q3 588 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 OR5W2Q8NH69 310 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 THAP3Q8WTV1 239 aaPredicted RBP9.77□□□□□ -0.85
CALD1-203ENST00000393118 THEM6Q8WUY1 208 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 TSEN15Q8WW01 171 aaKnown RBP9.77□□□□□ -0.85
CALD1-203ENST00000393118 ELSPBP1Q96BH3 223 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 TCF7L1Q9HCS4 588 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 ACOXLQ9NUZ1 547 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 TRIOBPQ9H2D6 2365 aa9.77□□□□□ -0.85
CALD1-203ENST00000393118 CDC14CA4D256 554 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 DISC1C4P0D8 188 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 PRAMEF26H0Y7S4 382 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 APBB3O95704 486 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 PIPP12273 146 aaPredicted RBP9.76□□□□□ -0.85
CALD1-203ENST00000393118 PSMB10P40306 273 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 SPAG16Q8N0X2 631 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 TOMM5Q8N4H5 51 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 FAM160A2Q8N612 972 aaPredicted RBP9.76□□□□□ -0.85
CALD1-203ENST00000393118 ZNF680Q8NEM1 530 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 TSNAXQ99598 290 aaKnown RBP9.76□□□□□ -0.85
CALD1-203ENST00000393118 ZNF559Q9BR84 538 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 NIPAL2Q9H841 368 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 LHX9Q9NQ69 397 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 NUDT15Q9NV35 164 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 MRPL15Q9P015 296 aaKnown RBP9.76□□□□□ -0.85
CALD1-203ENST00000393118 MUTYHQ9UIF7 546 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 CA14Q9ULX7 337 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 ENTPD2Q9Y5L3 495 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 TTLL8A6PVC2 850 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 P2RX6O15547 441 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 RLN1P04808 185 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 RD3LP0DJH9 198 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 ENPP1P22413 925 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 CXCR1P25024 350 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 FPR3P25089 353 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 FCN2Q15485 313 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 BAK1Q16611 211 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 DEFB133Q30KQ1 61 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 PYHIN1Q6K0P9 492 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 ZCCHC12Q6PEW1 402 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 VN1R4Q7Z5H5 301 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 PM20D2Q8IYS1 436 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 GPA33Q99795 319 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 FBRSQ9HAH7 460 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 BABAM2Q9NXR7 383 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 TAS2R3Q9NYW6 316 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 MRTO4Q9UKD2 239 aaKnown RBP9.76□□□□□ -0.85
CALD1-203ENST00000393118 ARRDC5A6NEK1 342 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 FLRT2O43155 660 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 PAHP00439 452 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 C1QBP02746 253 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 POU3F3P20264 500 aaPredicted RBP9.76□□□□□ -0.85
CALD1-203ENST00000393118 GABRA5P31644 462 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 C19orf57Q0VDD7 668 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 INSL4Q14641 139 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 USF2Q15853 346 aaPredicted RBP9.76□□□□□ -0.85
CALD1-203ENST00000393118 C1orf189Q5VU69 101 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 ELP2Q6IA86 826 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 FBXO42Q6P3S6 717 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 MEPCEQ7L2J0 689 aaKnown RBP9.76□□□□□ -0.85
CALD1-203ENST00000393118 SFTPA2Q8IWL1 248 aa9.76□□□□□ -0.85
CALD1-203ENST00000393118 MOSPD2Q8NHP6 518 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms