RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 RORAP35398 523 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 MVDP53602 400 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 DUSP2Q05923 314 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 TOMM20Q15388 145 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 C3orf33Q6P1S2 294 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 ATCAYQ86WG3 371 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 SLC43A2Q8N370 569 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 C19orf18Q8NEA5 215 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 CREB3L1Q96BA8 519 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 EXTL2Q9UBQ6 330 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 GPR160Q9UJ42 338 aa17.57■□□□□ 0.4
CCDC50-202ENST00000392456 TNRC6BQ9UPQ9 1833 aaKnown RBP17.56■□□□□ 0.4
CCDC50-202ENST00000392456 KCNK5O95279 499 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 GPX2P18283 190 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 PCBP4P57723 403 aaKnown RBP17.56■□□□□ 0.4
CCDC50-202ENST00000392456 SLC3A1Q07837 685 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 RUNX2Q13950 521 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 SEC23BQ15437 767 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 SNAPC1Q16533 368 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 SSX9Q7RTT3 188 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 C19orf47Q8N9M1 422 aaKnown RBP17.56■□□□□ 0.4
CCDC50-202ENST00000392456 MAL2Q969L2 176 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 PTHP01270 115 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 CFIP05156 583 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 C8orf89P0DMQ9 161 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 ALPPL2P10696 532 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 SSTR4P31391 388 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 RPL3P39023 403 aaKnown RBP17.56■□□□□ 0.4
CCDC50-202ENST00000392456 ARRB1P49407 418 aaPredicted RBP17.56■□□□□ 0.4
CCDC50-202ENST00000392456 GPR143P51810 404 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 DEFA5Q01523 94 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 DEFA6Q01524 100 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 HSPB3Q12988 150 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 SSX2Q16385 188 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 HLA-BQ31612 363 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 AMZ1Q400G9 498 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 C9orf152Q5JTZ5 239 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 PTOV1Q86YD1 416 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 OR10Q1Q8NGQ4 319 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 NETO1Q8TDF5 533 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 C2CD4CQ8TF44 421 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 RERGQ96A58 199 aaPredicted RBP17.56■□□□□ 0.4
CCDC50-202ENST00000392456 NARS2Q96I59 477 aaKnown RBP17.56■□□□□ 0.4
CCDC50-202ENST00000392456 SSR3Q9UNL2 185 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 ADAMTS9Q9P2N4 1935 aa17.56■□□□□ 0.4
CCDC50-202ENST00000392456 A0A1W2PRQ8 180 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 GTPBP1O00178 669 aaKnown RBP17.55■□□□□ 0.4
CCDC50-202ENST00000392456 GSTA4O15217 222 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 B4GALT2O60909 372 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 GADD45GO95257 159 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 NDUFB7P17568 137 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 STOMP27105 288 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 NCF4Q15080 339 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 RBMS2Q15434 407 aaKnown RBP17.55■□□□□ 0.4
CCDC50-202ENST00000392456 C3P1Q6ZMU1 363 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 CSNK1A1LQ8N752 337 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 OR5T3Q8NGG3 340 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 PHOSPHO1Q8TCT1 267 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 DIRAS2Q96HU8 199 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 PFDN5Q99471 154 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 SLC35A5Q9BS91 424 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 QRSL1Q9H0R6 528 aaKnown RBP17.55■□□□□ 0.4
CCDC50-202ENST00000392456 SEC16AO15027 2179 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 TEX13CA0A0J9YWL9 993 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 BRINP1O60477 761 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 ERAL1O75616 437 aaKnown RBP17.55■□□□□ 0.4
CCDC50-202ENST00000392456 MANFP55145 182 aaKnown RBP17.55■□□□□ 0.4
CCDC50-202ENST00000392456 TRA2BP62995 288 aaKnown RBP17.55■□□□□ 0.4
CCDC50-202ENST00000392456 FAM74A1Q5RGS3 127 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 TRIQKQ629K1 86 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 ELP2Q6IA86 826 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 ANGPTL8Q6UXH0 198 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 SLC34A3Q8N130 599 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 CNRIP1Q96F85 164 aaPredicted RBP17.55■□□□□ 0.4
CCDC50-202ENST00000392456 NEU1Q99519 415 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 NDUFAF4Q9P032 175 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 CES1P1Q9UKY3 287 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 PPIEQ9UNP9 301 aaKnown RBP17.55■□□□□ 0.4
CCDC50-202ENST00000392456 DMRT1Q9Y5R6 373 aa17.55■□□□□ 0.4
CCDC50-202ENST00000392456 CACNA1HO95180 2353 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 CXCR6O00574 342 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 SIGLEC5O15389 551 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 SCELO95171 688 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 PRG2P13727 222 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 ETFAP13804 333 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 DNASE1P24855 282 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 LAP3P28838 519 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 EPHA8P29322 1005 aaPredicted RBP17.54■□□□□ 0.4
CCDC50-202ENST00000392456 XKP51811 444 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 RPS7P62081 194 aaKnown RBP17.54■□□□□ 0.4
CCDC50-202ENST00000392456 ABHD18Q0P651 414 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 RGNQ15493 299 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 SPDYE7PQ495Y7 208 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 BICRALQ6AI39 1079 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 UXS1Q8NBZ7 420 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 COL21A1Q96P44 957 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 CHST8Q9H2A9 424 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 SMOC1Q9H4F8 434 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 C1GALT1Q9NS00 363 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 IGHV1OR21-1A0A087WYE8 117 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms