RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 FAM199XQ6PEV8 388 aaPredicted RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 NCCRP1Q6ZVX7 275 aaPredicted RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ACOT1Q86TX2 421 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 CCDC50Q8IVM0 306 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 NKAIN4Q8IVV8 208 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 TBC1D21Q8IYX1 336 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF683Q8IZ20 524 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ANKFN1Q8N957 763 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 SYT14Q8NB59 555 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 STXBP6Q8NFX7 210 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 OR52M1Q8NGK5 317 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 OR5L2Q8NGL0 311 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ANKRD49Q8WVL7 239 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 NRBF2Q96F24 287 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 NOL4LQ96MY1 436 aaPredicted RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 AMDHD1Q96NU7 426 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 KIR2DL4Q99706 377 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 OSBPL10Q9BXB5 764 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 TEX13BQ9BXU2 312 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 CRNKL1Q9BZJ0 848 aaKnown RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ZNHIT6Q9NWK9 470 aaKnown RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 PAK1IP1Q9NWT1 392 aaPredicted RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 RNF14Q9UBS8 474 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 APOBEC3BQ9UH17 382 aaKnown RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF221Q9UK13 617 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 MAB21L2Q9Y586 359 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 FLVCR1Q9Y5Y0 555 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ALG6Q9Y672 507 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 MAD1L1Q9Y6D9 718 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 FRMPD4Q14CM0 1322 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 MAP3K19Q56UN5 1328 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 KIF24Q5T7B8 1368 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 GRIN2AQ12879 1464 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 HECW2Q9P2P5 1572 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 IGLV8-61A0A075B6I0 122 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 OR5K4A6NMS3 321 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 ERI2A8K979 691 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 NPIPA7E9PJI5 369 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 G3V4G9 280 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 OR7A17O14581 309 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 NVLO15381 856 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 NMT2O60551 498 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 TPST2O60704 377 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF189O75820 626 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 RHOBTB1O94844 696 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 FGFR1OPO95684 399 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 STSP08842 583 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 RHOXF2BP0C7M4 288 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 NPIPA8P0DM63 369 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 HNF1AP20823 631 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 ADORA2BP29275 332 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 GCKP35557 465 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 RPL29P47914 159 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 SERPINB8P50452 374 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 AP3M2P53677 418 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 MRPS11P82912 194 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 DR1Q01658 176 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 OTUD4Q01804 1114 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 SPIBQ01892 262 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 OC90Q02509 493 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 MXD4Q14582 209 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 CCDC153Q494R4 210 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 LRRC23Q53EV4 343 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 PAGE2BQ5JRK9 111 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 WSCD1Q658N2 575 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 CXCL17Q6UXB2 119 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 NLRP9Q7RTR0 991 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 C16orf62Q7Z3J2 963 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 MOB3BQ86TA1 216 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF677Q86XU0 584 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 APOBEC3FQ8IUX4 373 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 CADM2Q8N3J6 435 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 DHRSXQ8N5I4 330 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 RNF10Q8N5U6 811 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 TRIML2Q8N7C3 387 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 FAM133AQ8N9E0 248 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 STEAP2Q8NFT2 490 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 OR10A7Q8NGE5 316 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 OR51G2Q8NGK0 314 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF606Q8WXB4 792 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 IFT81Q8WYA0 676 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 FAF2Q96CS3 445 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 SH3YL1Q96HL8 342 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 CELF6Q96J87 481 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 RPRD1AQ96P16 312 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 MCHR1Q99705 422 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 CCT7Q99832 543 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 RHOXF2Q9BQY4 288 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 UQCC2Q9BRT2 126 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 PARD6BQ9BYG5 372 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 TRIM4Q9C037 500 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 GLIPR2Q9H4G4 154 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 NCOR1P1Q9H4R4 102 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 TNFRSF19Q9NS68 423 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF275Q9NSD4 429 aaPredicted RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 VNN3Q9NY84 501 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 SIGLEC8Q9NYZ4 499 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 ANGPTL2Q9UKU9 493 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 PAIP2BQ9ULR5 123 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 NPIPA1Q9UND3 350 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms