RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 A0A1W2PRU2 124 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 DAPL1A0PJW8 107 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 ZC3H12DA2A288 527 aaKnown RBP13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 PYCARD-AS1I3L0S3 204 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 FOXE1O00358 373 aaPredicted RBP13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 LCMT2O60294 686 aaKnown RBP13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 RAD1O60671 282 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 STX11O75558 287 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 CXCL14O95715 111 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 IGHV2-70P01814 119 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 FGBP02675 491 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 MT-ND5P03915 603 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF3P17036 446 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 LAG3P18627 525 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 CTSOP43234 321 aaPredicted RBP13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 OMPP47874 163 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 HENMT1Q5T8I9 393 aaKnown RBP13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 USP53Q70EK8 1073 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 OLIG3Q7RTU3 272 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 HMGN2P46Q86SG4 172 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 OR2AK2Q8NG84 335 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 OR13C5Q8NGS8 318 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 WNT2BQ93097 391 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 TEX12Q9BXU0 123 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 CPEB1Q9BZB8 566 aaKnown RBP13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 FAM117AQ9C073 453 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 CACYBPQ9HB71 228 aaKnown RBP13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 C14orf105Q9NVL8 296 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 SLC22A7Q9Y694 548 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 PLXNB3Q9ULL4 1909 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 MYO10Q9HD67 2058 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 A0A1W2PPK0 400 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 UBE2QL1A1L167 161 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 FLRT2O43155 660 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 HTR3BO95264 441 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 PTAFRP25105 342 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 AP1S1P61966 158 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 SORDQ00796 357 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 STX4Q12846 297 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 RFLNAQ6ZTI6 216 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 TMPRSS11BQ86T26 416 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 DNAAF1Q8NEP3 725 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF671Q8TAW3 534 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 SMAP2Q8WU79 429 aaPredicted RBP13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 FCAMRQ8WWV6 532 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 OVCA2Q8WZ82 227 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 OR5P2Q8WZ92 322 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 SMAD5Q99717 465 aaKnown RBP13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 WDR13Q9H1Z4 485 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 DMRT3Q9NQL9 472 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 ZMIZ1Q9ULJ6 1067 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 LHX6Q9UPM6 363 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 PTPRSQ13332 1948 aa13.57□□□□□ -0.24
VPS9D1-201ENST00000389386 GOSR2O14653 212 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 REM1O75628 298 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 SPI1P17947 270 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 XPAP23025 273 aaPredicted RBP13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 CD70P32970 193 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 CNTN1Q12860 1018 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 ARSIQ5FYB1 569 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 C10orf91Q5T1B1 145 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 TPGS2Q68CL5 300 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 RPTNQ6XPR3 784 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 KLHDC8AQ8IYD2 350 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 EID2Q8N6I1 236 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 SETD7Q8WTS6 366 aaKnown RBP13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 CMTM3Q96MX0 182 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 BRD9Q9H8M2 597 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 IL20RAQ9UHF4 553 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 OR51B4Q9Y5P0 310 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 ANTXRLA6NF34 631 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 TO15178 435 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 FMO6PO60774 539 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 PAICSP22234 425 aaKnown RBP13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 DCTDP32321 178 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 AKR1C2P52895 323 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 MANFP55145 182 aaKnown RBP13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 AKR1C1Q04828 323 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 ECH1Q13011 328 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 RAB33AQ14088 237 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 FAM109BQ6ICB4 259 aaPredicted RBP13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 OR2W3Q7Z3T1 314 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 OR10H4Q8NGA5 316 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 OR56A3Q8NH54 315 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 GHSRQ92847 366 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 ALG14Q96F25 216 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 NDC1Q9BTX1 674 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 KCNK12Q9HB15 430 aa13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 SEBOXQ9HB31 216 aaPredicted RBP13.56□□□□□ -0.24
VPS9D1-201ENST00000389386 TMEM200CA6NKL6 621 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF197O14709 1029 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PIP5K1CO60331 668 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 UCHL1P09936 223 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 ALPPL2P10696 532 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 NRG3P56975 720 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 UBE2MP61081 183 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PPIAP62937 165 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 MPPED2Q15777 294 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 DMKNQ6E0U4 476 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PLBD1Q6P4A8 553 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms