RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 GPATCH8Q9UKJ3 1502 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 NPC1L1Q9UHC9 1359 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 LAMB2P55268 1798 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TNS2Q63HR2 1409 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 IGHV5-51A0A0C4DH38 117 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 A0A1B0GVX0 72 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PLAC8L1A1L4L8 177 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PRSS37A4D1T9 235 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 OR6C65A6NJZ3 312 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 INS-IGF2F8WCM5 200 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 H3BMQ9 156 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 C3orf84H3BNL1 204 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 UBXN8O00124 270 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 XKRYO14609 159 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 XPO1O14980 1071 aaKnown RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 AGPAT2O15120 278 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 HCRTR1O43613 425 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NME2P1O60361 137 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ADCY5O95622 1261 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 OLFM2O95897 454 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 LGI1O95970 557 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 IGLV2-8P01709 118 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 OR56A5P0C7T3 313 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 GSTT2P0CG29 244 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 GSTT2BP0CG30 244 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PRPS2P11908 318 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 BCKDHAP12694 445 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 GNSP15586 552 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 XRCC1P18887 633 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CALB2P22676 271 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CXCR2P25025 360 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NMT1P30419 496 aaKnown RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 KRT20P35900 424 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 HTR5AP47898 357 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PITPNBP48739 271 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 SLC11A1P49279 550 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 KLK7P49862 253 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 GDI2P50395 445 aaKnown RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 GZMMP51124 257 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 DLX1P56177 255 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 STARD6P59095 220 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 HERVK_113P63132 956 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ERVK-8P63133 956 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CCZ1BP86790 482 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CCZ1P86791 482 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TSPY1Q01534 308 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 BDH1Q02338 343 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 RGS1Q08116 209 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF763Q0D2J5 394 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ASPHQ12797 758 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NME3Q13232 169 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PLD1Q13393 1074 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TFDP1Q14186 410 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ARL6IP1Q15041 203 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CARTPTQ16568 116 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NDUFA9Q16795 377 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 SLC5A12Q1EHB4 618 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 KBTBD12Q3ZCT8 623 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ACSF3Q4G176 576 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 IFI44LQ53G44 452 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PARP10Q53GL7 1025 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 KLF17Q5JT82 389 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 VAX1Q5SQQ9 334 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 MPP7Q5T2T1 576 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PRAMEF8Q5VWM4 474 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TTC19Q6DKK2 380 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 MORN3Q6PF18 240 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PET117Q6UWS5 81 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 GBP6Q6ZN66 633 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 FAM92BQ6ZTR7 304 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 GOLGA7Q7Z5G4 137 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 WDR86Q86TI4 376 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 YRDCQ86U90 279 aaKnown RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TRIM69Q86WT6 500 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ZDHHC21Q8IVQ6 265 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 VSTM4Q8IW00 320 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CNTN4Q8IWV2 1026 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ARFGAP2Q8N6H7 521 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 C15orf56Q8N910 161 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NAT8LQ8N9F0 302 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ATAD1Q8NBU5 361 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CNNM3Q8NE01 707 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF680Q8NEM1 530 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 OR2L3Q8NG85 312 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 OR4F15Q8NGB8 312 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 OR10G9Q8NGN4 311 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CNIH3Q8TBE1 160 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ACTRT1Q8TDG2 376 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 RTN4IP1Q8WWV3 396 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PHYHIPQ92561 330 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TEKT1Q969V4 418 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ADIPOR1Q96A54 375 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TM4SF19Q96DZ7 209 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NEURL3Q96EH8 262 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 SDSLQ96GA7 329 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 VMP1Q96GC9 406 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CELF6Q96J87 481 aaKnown RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 DNAJC1Q96KC8 554 aaKnown RBP0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms