RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 RHOUQ7L0Q8 258 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 ZNF227Q86WZ6 799 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 GPRC5AQ8NFJ5 357 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 OR1S2Q8NGQ3 325 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 OR6N1Q8NGY5 312 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 HMGB4Q8WW32 186 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 S100PBPQ96BU1 408 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 WDR89Q96FK6 387 aaPredicted RBP6.74□□□□□ -1.33
DDX58-202ENST00000379883 LGR4Q9BXB1 951 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 BCL2L10Q9HD36 194 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 EXOSC3Q9NQT5 275 aaKnown RBP6.74□□□□□ -1.33
DDX58-202ENST00000379883 FAM86C1Q9NVL1 165 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 PPP1R14DQ9NXH3 145 aa6.74□□□□□ -1.33
DDX58-202ENST00000379883 FCF1Q9Y324 198 aaKnown RBP6.74□□□□□ -1.33
DDX58-202ENST00000379883 A0A0G2JK05 382 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 CPSF4LA6NMK7 179 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 SAP18O00422 153 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 HMGN4O00479 90 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 SEMA7AO75326 666 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 NT5EP21589 574 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 PAX6P26367 422 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 CD81P60033 236 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 VGLL4Q14135 290 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 AKIRIN2Q53H80 203 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 TMEM71Q6P5X7 295 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 FCRLAQ7L513 359 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 NR2C2APQ86WQ0 139 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 SIRT6Q8N6T7 355 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 OR6T1Q8NGN1 323 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 SNIP1Q8TAD8 396 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 SMPDL3BQ92485 455 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 CPNE4Q96A23 557 aaPredicted RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 C14orf79Q96F83 325 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 SAMD8Q96LT4 415 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 MS4A4EQ96PG1 132 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 RBM14Q96PK6 669 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 SLC25A21Q9BQT8 299 aaPredicted RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 TOLLIPQ9H0E2 274 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 ALX4Q9H161 411 aaPredicted RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 TREM2Q9NZC2 230 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 RBPJLQ9UBG7 517 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 LHX3Q9UBR4 397 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 NOP16Q9Y3C1 178 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 TRBV2A0A0J9YWF9 115 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 OR5H14A6NHG9 310 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 TSTD3H0UI37 97 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 MAN2B1O00754 1011 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 TBX19O60806 448 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 ETHE1O95571 254 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 F2P00734 622 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 CD22P20273 847 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 PDHA2P29803 388 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 GLP1RP43220 463 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 CBFBQ13951 182 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 SERTAD2Q14140 314 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 LBHQ53QV2 105 aaPredicted RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 OR2B11Q5JQS5 317 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 OR10K2Q6IF99 312 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 ZNF620Q6ZNG0 422 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 SLCO4C1Q6ZQN7 724 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 MBOAT2Q6ZWT7 520 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 MISPQ8IVT2 679 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 KLHDC8AQ8IYD2 350 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 TMEM99Q8N816 258 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 BOLLQ8N9W6 283 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 OR56A3Q8NH54 315 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 FGF11Q92914 225 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 RAB3CQ96E17 227 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 TRMT2BQ96GJ1 504 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 OR1F2PQ96R84 312 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 ELF4Q99607 663 aaPredicted RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 HINT3Q9NQE9 182 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 ZCCHC3Q9NUD5 404 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 LRFN2Q9ULH4 789 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 ASF1AQ9Y294 204 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 KPTNQ9Y664 436 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 SLC22A7Q9Y694 548 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 A0A0G2JLL6 359 aaPredicted RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 C5orf52A6NGY3 159 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 MAOAP21397 527 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 CSNK1DP48730 415 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 PTH2RP49190 550 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 DCDP81605 110 aaKnown RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 BIKQ13323 160 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 EIPR1Q53HC9 387 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 FAM27D1Q5T7N8 215 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 C11orf87Q6NUJ2 197 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 FAM220AQ7Z4H9 259 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 PRRT2Q7Z6L0 340 aaPredicted RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 RANBP3LQ86VV4 465 aaPredicted RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 OR56A1Q8NGH5 318 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 OR52B4Q8NGK2 314 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 STK35Q8TDR2 534 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 THRSPQ92748 146 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 TMEM169Q96HH4 297 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 TMEM121BQ9BXQ6 578 aaPredicted RBP6.73□□□□□ -1.33
DDX58-202ENST00000379883 PBX4Q9BYU1 374 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 UQCC1Q9NVA1 299 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 GHRLQ9UBU3 117 aa6.73□□□□□ -1.33
DDX58-202ENST00000379883 CBY1Q9Y3M2 126 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms