RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 EI24O14681 340 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 SUSD5O60279 629 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 PIP5K1CO60331 668 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 ZIC3O60481 467 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 RASAL1O95294 804 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 POU2F1P14859 743 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 UGT2B15P54855 530 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 IL1RL1Q01638 556 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 WIPI1Q5MNZ9 446 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 OGFRL1Q5TC84 451 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 Q6ZS92 163 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 MBOAT2Q6ZWT7 520 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 ADGRG3Q86Y34 549 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 NRMQ8IXM6 262 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 PFN4Q8NHR9 129 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 POC1BQ8TC44 478 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 MAGEE2Q8TD90 523 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 FEVQ99581 238 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 PIGQQ9BRB3 760 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 FUZQ9BT04 418 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 TMEM185BQ9H7F4 350 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 SMURF2Q9HAU4 748 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 C12orf10Q9HB07 376 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 KRCC1Q9NPI7 259 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 SERINC1Q9NRX5 453 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 LUZP4Q9P127 313 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 CHRNA9Q9UGM1 479 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 MED31Q9Y3C7 131 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 ZZEF1O43149 2961 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 TMEM72A0PK05 275 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 GLSO94925 669 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 CELA3AP09093 270 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 PEPDP12955 493 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 IFNGR2P38484 337 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 ALDH6A1Q02252 535 aaKnown RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 CRYZQ08257 329 aaKnown RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 SLC25A53Q5H9E4 307 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 LINC00114Q6XXX2 140 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 PRICKLE2Q7Z3G6 844 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 MEX3DQ86XN8 651 aaKnown RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 CDK20Q8IZL9 346 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 GTPBP8Q8N3Z3 284 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 LINC00471Q8N535 108 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 AQP11Q8NBQ7 271 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 PIGXQ8TBF5 258 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 DNAJA3Q96EY1 480 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 UBL7Q96S82 380 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-203ENST00000377344 SLC29A1Q99808 456 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 KLHL4Q9C0H6 718 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 RASSF4Q9H2L5 321 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 VCXQ9H320 206 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 VCX3BQ9H321 246 aa11.72□□□□□ -0.53
CBWD3-203ENST00000377344 ATMQ13315 3056 aa11.71□□□□□ -0.53
CBWD3-203ENST00000377344 OR2M5A3KFT3 312 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 H3BML4 177 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 ETV2O00321 342 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 TFECO14948 347 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 GASTP01350 101 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 OPN1LWP04000 364 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 TFPIP10646 304 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 IFI30P13284 250 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 ZNF24P17028 368 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 IL11P20809 199 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 ADH6P28332 368 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 PLEKHN1Q494U1 663 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 NADK2Q4G0N4 442 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 ANKRD34AQ69YU3 496 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 C3orf33Q6P1S2 294 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 RNF113BQ8IZP6 322 aaKnown RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 C10orf53Q8N6V4 93 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 SMPDL3BQ92485 455 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 GTPBP3Q969Y2 492 aaKnown RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 FAM46AQ96IP4 442 aaKnown RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 SFXN2Q96NB2 322 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 RBM4BQ9BQ04 359 aaKnown RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 ZNF426Q9BUY5 554 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 RBM4Q9BWF3 364 aaKnown RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 OR2B2Q9GZK3 357 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 OR11A1Q9GZK7 315 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 ADNPQ9H2P0 1102 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 ZNF556Q9HAH1 456 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 MEPEQ9NQ76 525 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 C20orf141Q9NUB4 165 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 TUBD1Q9UJT1 453 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 SPIN1Q9Y657 262 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-203ENST00000377344 NCKAP5O14513 1909 aa11.71□□□□□ -0.54
CBWD3-203ENST00000377344 IGKV1D-42A0A075B6H8 117 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ZC3H12DA2A288 527 aaKnown RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 A8MVM7 634 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 HPNP05981 417 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ANXA8P13928 327 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ZNF17P17021 662 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 SFTPDP35247 375 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 VHLP40337 213 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 GPR4P46093 362 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 DLX5P56178 289 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 FOXK2Q01167 660 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 DAG1Q14118 895 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms