RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 GALEQ14376 348 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 HNRNPA1L2Q32P51 320 aaKnown RBP6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ESPNLQ6ZVH7 1005 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 PLA2G12AQ9BZM1 189 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 HOXD1Q9GZZ0 328 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 POLE3Q9NRF9 147 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 AGPAT2O15120 278 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 LRRTM2O43300 516 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 PRAMEF2O60811 474 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 CHRM4P08173 479 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 SYPP08247 313 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 CSF1P09603 554 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 CCNOP22674 350 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 OPRD1P41143 372 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 CTBSQ01459 385 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ASAH1Q13510 395 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 EOGTQ5NDL2 527 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 NDUFAF7Q7L592 441 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 MS4A15Q8N5U1 240 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 CLDN22Q8N7P3 220 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 OR4K17Q8NGC6 315 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 FAM83CQ9BQN1 747 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ST6GALNAC5Q9BVH7 336 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 RBFOX1Q9NWB1 397 aaKnown RBP6.09□□□□□ -1.43
SMC1A-202ENST00000375340 KNL1Q8NG31 2342 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 HYAL3O43820 417 aaPredicted RBP6.09□□□□□ -1.44
SMC1A-202ENST00000375340 UBL4AP11441 157 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 HHEXQ03014 270 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 OR5M10Q6IEU7 315 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 TCEAL6Q6IPX3 200 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 OR2L8Q8NGY9 312 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 NMNAT3Q96T66 252 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 SLIRPQ9GZT3 109 aaKnown RBP6.09□□□□□ -1.44
SMC1A-202ENST00000375340 KIAA0355O15063 1070 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 HNRNPA1P09651 372 aaKnown RBP eCLIP6.09□□□□□ -1.44
SMC1A-202ENST00000375340 CD22P20273 847 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 RASGEF1BQ0VAM2 473 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 GBX1Q14549 363 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 FAM69AQ5T7M9 428 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 VASNQ6EMK4 673 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 Q6ZSR6 202 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF700Q9H0M5 742 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 NOX4Q9NPH5 578 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 MBNL1Q9NR56 388 aaKnown RBP6.09□□□□□ -1.44
SMC1A-202ENST00000375340 KLF15Q9UIH9 416 aa6.09□□□□□ -1.44
SMC1A-202ENST00000375340 CRTAPO75718 401 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 RNH1P13489 461 aaKnown RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 FAM69BQ5VUD6 431 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SLC35D2Q76EJ3 337 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 GLB1L2Q8IW92 636 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ZSCAN1Q8NBB4 408 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM43Q9BTV4 400 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 LIN7BQ9HAP6 207 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 PRODH2Q9UF12 536 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SLC6A14Q9UN76 642 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 V9GY05 133 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 MYLKQ15746 1914 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TRAPPC6AO75865 159 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TRA2BP62995 288 aaKnown RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 KRBOX4Q5JUW0 171 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 NKAIN2Q5VXU1 208 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 OTPQ5XKR4 325 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TECPR1Q7Z6L1 1165 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 C10orf111Q8N326 155 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 OR9A4Q8NGU2 314 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 OR2M2Q96R28 347 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 C7orf50Q9BRJ6 194 aaKnown RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 EIF5A2Q9GZV4 153 aaKnown RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 NRIP3Q9NQ35 241 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ACOXLQ9NUZ1 547 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 FLVCR2Q9UPI3 526 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF337Q9Y3M9 751 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 KCNE1BA0A087WTH5 132 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 MYOGP15173 224 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TCTE1Q5JU00 501 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 DNAAF1Q8NEP3 725 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM185AQ8NFB2 350 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SLC7A6Q92536 515 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 VRK1Q99986 396 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 CDCA4Q9BXL8 241 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 GON7Q9BXV9 100 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 LCMT2O60294 686 aaKnown RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 IFNA21P01568 189 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 CST5P28325 142 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 MTNR1BP49286 362 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 MPP7Q5T2T1 576 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 NXNL2Q5VZ03 156 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 KIAA1211LQ6NV74 962 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 CDRT4Q8N9R6 151 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 EMC7Q9NPA0 242 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 C1GALT1Q9NS00 363 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 H3BML4 177 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SLC43A1O75387 559 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 PIPP12273 146 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 HOXA9P31269 272 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 BMPR1AP36894 532 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ARHGDIBP52566 201 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 OCLNQ16625 522 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 UNQ6126/PRO20091Q6UXV3 157 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SYT9Q86SS6 491 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms