RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 PLA2G2FQ9BZM2 168 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 UCK2Q9BZX2 261 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 SLIRPQ9GZT3 109 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 TWSG1Q9GZX9 223 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 NXF2Q9GZY0 626 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 ABCG4Q9H172 646 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 DCSTAMPQ9H295 470 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 MMP27Q9H306 513 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 OR51I1Q9H343 314 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 GLIPR2Q9H4G4 154 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 SAP30LQ9HAJ7 183 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 SLC25A19Q9HC21 320 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 MRPS30Q9NP92 439 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 ZDHHC4Q9NPG8 344 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 SLC35C2Q9NQQ7 365 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 RXFP3Q9NSD7 469 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ZCCHC3Q9NUD5 404 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 IMP3Q9NV31 184 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 LYARQ9NX58 379 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 CCDC59Q9P031 241 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 C5AR2Q9P296 337 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 SEC14L3Q9UDX4 400 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 SCML1Q9UN30 329 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 A4GNTQ9UNA3 340 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ASB4Q9Y574 426 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 OR1A2Q9Y585 309 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 KLK4Q9Y5K2 254 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 HEBP2Q9Y5Z4 205 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 GOLGA4Q13439 2230 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 A0A0G2JPF8 293 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 PDZK1P1A8MUH7 402 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 HNRNPCL2B2RXH8 293 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 HNRNPCL3B7ZW38 293 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 C4orf51C9J302 202 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 J3QRK9 145 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 K7EQS6 105 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 TLR4O00206 839 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 TAF4O00268 1085 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 HAT1O14929 419 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 EMC8O43402 210 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ERI3O43414 337 aaKnown RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 UGT2B17O75795 530 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 AIFM1O95831 613 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 LGI1O95970 557 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 TOMM40O96008 361 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 PAK4O96013 591 aaPredicted RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 PLAUP00749 431 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 PTHP01270 115 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 TK1P04183 234 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 RPLP0P05388 317 aaKnown RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 FHP07954 510 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 STSP08842 583 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ALOX5P09917 674 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 OCM2P0CE71 109 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 OCMP0CE72 109 aaPredicted RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 HNRNPCL4P0DMR1 293 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 OR12D1P0DN82 309 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 NR2F1P10589 423 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 F3P13726 295 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 EGR1P18146 543 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 CD72P21854 359 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ATP5A1P25705 553 aaKnown RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 NDUFS1P28331 727 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 CD40LGP29965 261 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ALDH4A1P30038 563 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 C21orf33P30042 268 aaPredicted RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 GDI1P31150 447 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 RANBP1P43487 201 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 GSSP48637 474 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 CLK1P49759 484 aaKnown RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 XKP51811 444 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 NCBP2P52298 156 aaKnown RBP eCLIP4.41□□□□□ -1.7
USP48-202ENST00000374730 NUDT6P53370 316 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 STXBP1P61764 594 aaKnown RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 RHAGQ02094 409 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 TGM3Q08188 693 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 FUT5Q11128 374 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ST3GAL4Q11206 333 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 COX10Q12887 443 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 SLAMF1Q13291 335 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 SGCGQ13326 291 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 OXA1LQ15070 435 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 RPE65Q16518 533 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 SYPL1Q16563 259 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 TIMM50Q3ZCQ8 353 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ZNF404Q494X3 552 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 SLC25A30Q5SVS4 291 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 NDUFAF5Q5TEU4 345 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 MFSD4BQ5TF39 518 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 FAM109BQ6ICB4 259 aaPredicted RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 ANKRD54Q6NXT1 300 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 SLC48A1Q6P1K1 146 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ADCK2Q7Z695 626 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 PAQR7Q86WK9 346 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 CACUL1Q86Y37 369 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 LACC1Q8IV20 430 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 AMER3Q8N944 861 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ACOT4Q8N9L9 421 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 MORN4Q8NDC4 146 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 B3GNT7Q8NFL0 401 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms