RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TGM4P49221 684 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 PPM1FP49593 454 aaPredicted RBP8□□□□□ -1.13
SNRNP40-202ENST00000373720 RGS19P49795 217 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 GBX2P52951 348 aaPredicted RBP8□□□□□ -1.13
SNRNP40-202ENST00000373720 SCAND1P57086 179 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC26A5P58743 744 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 TFF2Q03403 129 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 CRYZQ08257 329 aaKnown RBP8□□□□□ -1.13
SNRNP40-202ENST00000373720 CBFBQ13951 182 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 DEFB133Q30KQ1 61 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 CRTC2Q53ET0 693 aaPredicted RBP8□□□□□ -1.13
SNRNP40-202ENST00000373720 TMEM31Q5JXX7 168 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 CLEC12AQ5QGZ9 265 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 LIPKQ5VXJ0 399 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 FAM205BPQ63HN1 556 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF544Q6NX49 715 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 TTLL10Q6ZVT0 673 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 HIST3H2AQ7L7L0 130 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 NLGN4XQ8N0W4 816 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 PARP16Q8N5Y8 322 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 STK35Q8TDR2 534 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 HIST1H2ACQ93077 130 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 ADIPOR1Q96A54 375 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 C3orf49Q96BT1 292 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF501Q96CX3 271 aaPredicted RBP8□□□□□ -1.13
SNRNP40-202ENST00000373720 UBL7Q96S82 380 aaPredicted RBP8□□□□□ -1.13
SNRNP40-202ENST00000373720 TTYH2Q9BSA4 534 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 DPH1Q9BZG8 443 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 MEPEQ9NQ76 525 aaPredicted RBP8□□□□□ -1.13
SNRNP40-202ENST00000373720 HINT3Q9NQE9 182 aaKnown RBP8□□□□□ -1.13
SNRNP40-202ENST00000373720 SDHAF3Q9NRP4 125 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 FGF21Q9NSA1 209 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 CHRNA9Q9UGM1 479 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 CLEC2DQ9UHP7 191 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 CMAHPQ9Y471 501 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 SNRNP200O75643 2136 aaKnown RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 C12orf71A8MTZ7 269 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 CASKO14936 926 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 DNAJB6O75190 326 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 RGS9O75916 674 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 CD14P08571 375 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 IGFBP1P08833 259 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 GKN3PP0CG01 181 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 PRG2P13727 222 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ALAS2P22557 587 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 MAPK3P27361 379 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 EPHA8P29322 1005 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 SSTR4P31391 388 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 CSNK1EP49674 416 aaKnown RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 DIO1P49895 249 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 MLLT10P55197 1068 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ID2Q02363 134 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 MLLT1Q03111 559 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ZP2Q05996 745 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 C17orf67Q0P5P2 114 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 SKP2Q13309 424 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 NSDHLQ15738 373 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 TBC1D25Q3MII6 688 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ARHGAP40Q5TG30 622 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 PLBD1Q6P4A8 553 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 RPL22L1Q6P5R6 122 aaKnown RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 NPSR1Q6W5P4 371 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 WDR88Q6ZMY6 472 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ATG4DQ86TL0 474 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 LYSMD2Q8IV50 215 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 CACTIN-AS1Q8N1I8 211 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 FAM160A2Q8N612 972 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ARIH2OSQ8N7S6 290 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 OR5W2Q8NH69 310 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 RNF217Q8TC41 542 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF721Q8TF20 911 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 METTL21AQ8WXB1 218 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 DEDD2Q8WXF8 326 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ST8SIA1Q92185 356 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 PTP4A1Q93096 173 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 NACC2Q96BF6 587 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ZC3H10Q96K80 434 aaKnown RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 CNN2Q99439 309 aaKnown RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF649Q9BS31 505 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 ALG8Q9BVK2 526 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC7A5P2Q9GIP4 190 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 SPRTNQ9H040 489 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 WDR54Q9H977 334 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 SMURF1Q9HCE7 757 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 NANSQ9NR45 359 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 CTPS2Q9NRF8 586 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 STARD5Q9NSY2 213 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 FLRT3Q9NZU0 649 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 CORINQ9Y5Q5 1042 aa7.99□□□□□ -1.13
SNRNP40-202ENST00000373720 TRAV36DV7A0A075B6V5 113 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF879B4DU55 563 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 J3QRK9 145 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 CDK2AP1O14519 115 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 PDCD5O14737 125 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 PLD2O14939 933 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 OGG1O15527 345 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 LRRTM2O43300 516 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 RNF13O43567 381 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 TSPAN2O60636 221 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC25A12O75746 678 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms