RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 PCDHGA9Q9Y5G4 932 aaKnown RBP15.13■□□□□ 0.01
SDC4-201ENST00000372733 A0A1W2PPL8 197 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 STX11O75558 287 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 AGR2O95994 175 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 NID1P14543 1247 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 RPS11P62280 158 aaKnown RBP eCLIP15.12■□□□□ 0.01
SDC4-201ENST00000372733 ACTC1P68032 377 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 ACTA1P68133 377 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 NOGQ13253 232 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 HES5Q5TA89 166 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 FIGNL1Q6PIW4 674 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 KANSL1Q7Z3B3 1105 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 UBE2Q1Q7Z7E8 422 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 CDK20Q8IZL9 346 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 OR2T4Q8NH00 348 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 SLC25A18Q9H1K4 315 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 HRASLSQ9HDD0 168 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 PRSS16Q9NQE7 514 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 NTMQ9P121 344 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 MAB21L2Q9Y586 359 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 SCN2AQ99250 2005 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 KHNYNO15037 678 aaKnown RBP15.12■□□□□ 0.01
SDC4-201ENST00000372733 RPS4Y1P22090 263 aaKnown RBP15.12■□□□□ 0.01
SDC4-201ENST00000372733 CCR9P51686 369 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 TCTE1Q5JU00 501 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 ZNF425Q6IV72 752 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 RPL13AP3Q6NVV1 102 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 SEZ6L2Q6UXD5 910 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 SLITRK4Q8IW52 837 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 SDR9C7Q8NEX9 313 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 OR52I2Q8NH67 350 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 ERMAPQ96PL5 475 aaPredicted RBP15.12■□□□□ 0.01
SDC4-201ENST00000372733 TNFRSF13CQ96RJ3 184 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 ACTR6Q9GZN1 396 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 SERGEFQ9UGK8 458 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 SCML1Q9UN30 329 aa15.12■□□□□ 0.01
SDC4-201ENST00000372733 MRPS23Q9Y3D9 190 aaKnown RBP15.12■□□□□ 0.01
SDC4-201ENST00000372733 TBC1D3EA0A087X179 549 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 ZNF860A6NHJ4 632 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 ARPC1BO15143 372 aaKnown RBP15.11■□□□□ 0.01
SDC4-201ENST00000372733 MID1O15344 667 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 ARL6IP5O75915 188 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 PAK4O96013 591 aaPredicted RBP15.11■□□□□ 0.01
SDC4-201ENST00000372733 SERPINA3P01011 423 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 ALDOBP05062 364 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 DBIP07108 87 aaKnown RBP15.11■□□□□ 0.01
SDC4-201ENST00000372733 UCHL1P09936 223 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 CMPK1P30085 196 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 PSMB10P40306 273 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 TSFMP43897 325 aaKnown RBP15.11■□□□□ 0.01
SDC4-201ENST00000372733 FGL2Q14314 439 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 RPE65Q16518 533 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 UBE2NLQ5JXB2 153 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 SERPINA12Q8IW75 414 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 MRPL43Q8N983 215 aaKnown RBP15.11■□□□□ 0.01
SDC4-201ENST00000372733 OR4K14Q8NGD5 310 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 RDH8Q9NYR8 311 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 WSB2Q9NYS7 404 aaPredicted RBP15.11■□□□□ 0.01
SDC4-201ENST00000372733 WASP42768 502 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 DEFB134Q4QY38 66 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 AGBL4Q5VU57 503 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 FAAP20Q6NZ36 180 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 BAIAP2L2Q6UXY1 529 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 SLC51BQ86UW2 128 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 COX18Q8N8Q8 333 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 OR52E2Q8NGJ4 325 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 GAL3ST3Q96A11 431 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 RAB7BQ96AH8 199 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 GSX2Q9BZM3 304 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 CA10Q9NS85 328 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 MGAT4CQ9UBM8 478 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 GNG8Q9UK08 70 aa15.11■□□□□ 0.01
SDC4-201ENST00000372733 DENND4AQ7Z401 1863 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 CTDSPLO15194 276 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 OGG1O15527 345 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 PTHLHP12272 177 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 RAD52P43351 418 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 MAGEB1P43366 347 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 TAGLNQ01995 201 aaKnown RBP15.1■□□□□ 0.01
SDC4-201ENST00000372733 SLC25A25Q6KCM7 469 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 ZAR1Q86SH2 424 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 FAM98AQ8NCA5 519 aaKnown RBP15.1■□□□□ 0.01
SDC4-201ENST00000372733 OR4K13Q8NH42 304 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 RBPMSQ93062 196 aaKnown RBP15.1■□□□□ 0.01
SDC4-201ENST00000372733 SLC25A38Q96DW6 304 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 ELMOD3Q96FG2 381 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 RADILQ96JH8 1075 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 GFI1Q99684 422 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 SARGQ9BW04 601 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 ZCCHC4Q9H5U6 513 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 C12orf10Q9HB07 376 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 MCCC2Q9HCC0 563 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 POT1Q9NUX5 634 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 HCN3Q9P1Z3 774 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 POMT2Q9UKY4 750 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 TRBV2A0A0J9YWF9 115 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 PTP4A3O75365 173 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 RGS11O94810 467 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 EDNRAP25101 427 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 PTGS2P35354 604 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms