RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CEP290O15078 2479 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 TIMM8AO60220 97 aaPredicted RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 DOK2O60496 412 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 ST6GAL1P15907 406 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 HOXB9P17482 250 aaPredicted RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 TRHRP34981 398 aaPredicted RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 AGAP7PQ5VUJ5 663 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 SLC25A25Q6KCM7 469 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 BHLHA9Q7RTU4 235 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 AAED1Q7RTV5 226 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 RPS19BP1Q86WX3 136 aaKnown RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 AGAP4Q96P64 663 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 MENTQ9BUN1 341 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 ALG8Q9BVK2 526 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 PAPOLGQ9BWT3 736 aaKnown RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 IGHV3-64DA0A0J9YX35 117 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 OR14I1A6ND48 311 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 TEX46H3BTG2 121 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 C5orf46Q6UWT4 87 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 SLC16A11Q8NCK7 471 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 OR8H1Q8NGG4 311 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 UTP4Q969X6 686 aaKnown RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 LMF1Q96S06 567 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 SLC23A2Q9UGH3 650 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 LRIT2A6NDA9 550 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 M0R129 80 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 PITPNBP48739 271 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 RAB40BQ12829 278 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 TSPAN31Q12999 210 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 TRIP6Q15654 476 aaKnown RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 DTWD2Q8NBA8 298 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 BAHD1Q8TBE0 780 aaPredicted RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 PCED1AQ9H1Q7 454 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 DECR2Q9NUI1 292 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 NOP16Q9Y3C1 178 aaKnown RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 PLOD2O00469 737 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 RAB3BP20337 219 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 ARL6IP1Q15041 203 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 YOD1Q5VVQ6 348 aaPredicted RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 SLC16A14Q7RTX9 510 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 VASH2Q86V25 355 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 FUNDC1Q8IVP5 155 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 LSM14AQ8ND56 463 aaKnown RBP10.76□□□□□ -0.69
SYNE1-204ENST00000367248 OLIG1Q8TAK6 271 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 PIGCQ92535 297 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 RFT1Q96AA3 541 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 TRIB1Q96RU8 372 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 TEX101Q9BY14 249 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 POTEKPQ9BYX7 375 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF69Q9UC07 566 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 USP22Q9UPT9 525 aa10.76□□□□□ -0.69
SYNE1-204ENST00000367248 DCDC2BA2VCK2 349 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 INMT-MINDY4F8WBC2 141 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 PLAG1Q6DJT9 500 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 ETAA1Q9NY74 926 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 PELI3Q8N2H9 469 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 FCAMRQ8WWV6 532 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 TCEAL3Q969E4 200 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 PHOX2BQ99453 314 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 POLHQ9Y253 713 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 EFNA3P52797 238 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 ELAVL1Q15717 326 aaKnown RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 CYHR1Q6ZMK1 362 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 TRILQ7L0X0 811 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 RNF113BQ8IZP6 322 aaKnown RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 PAPD5Q8NDF8 572 aaKnown RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 GPR148Q8TDV2 347 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 TFAP2CQ92754 450 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 SGPP1Q9BX95 441 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 MYO18AQ92614 2054 aaKnown RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 APC2O95996 2303 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 MRPS14O60783 128 aaKnown RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 IGHG1P01857 330 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 PVALBP20472 110 aaPredicted RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 METAP1P53582 386 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 AWAT2Q6E213 333 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 TCEAL2Q9H3H9 227 aaPredicted RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 GPR160Q9UJ42 338 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 EVPLQ92817 2033 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 CXADRP78310 365 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 RAB11BQ15907 218 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 XKRXQ6PP77 449 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 BAIAP2L2Q6UXY1 529 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 GDPGP1Q6ZNW5 385 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 SLC22A16Q86VW1 577 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 TMEM151AQ8N4L1 468 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 DDX31Q9H8H2 851 aaKnown RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 CBX7O95931 251 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 HBMQ6B0K9 141 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 FAM199XQ6PEV8 388 aaPredicted RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 MARCH3Q86UD3 253 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 H1FXQ92522 213 aaKnown RBP10.75□□□□□ -0.69
SYNE1-204ENST00000367248 C1QTNF3Q9BXJ4 246 aa10.75□□□□□ -0.69
SYNE1-204ENST00000367248 H7C1C5 153 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 MAGEA2P43356 314 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 LCN6P62502 163 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 GUSBP11Q6P575 273 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 SYCE2Q6PIF2 218 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 WFDC8Q8IUA0 241 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 CENPSQ8N2Z9 138 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms