RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ENTPD4Q9Y227 616 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 COQ4Q9Y3A0 265 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 MUC22E2RYF6 1773 aaPredicted RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 COL5A1P20908 1838 aaPredicted RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 MYO9AB2RTY4 2548 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 LOC390937A0A1W2PQ73 354 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 RGSL1A5PLK6 1076 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 PRAMEF26H0Y7S4 382 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 TFECO14948 347 aaPredicted RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 MCF2LO15068 1137 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZNF749O43361 778 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 IGLV3-25P01717 112 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 PTMAP06454 111 aaKnown RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 CD1DP15813 335 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 GTF2H1P32780 548 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 CSRP3P50461 194 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 PLK1P53350 603 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 POLR2FP61218 127 aaKnown RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 RPS27AP62979 156 aaKnown RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 ENPEPQ07075 957 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 OVGP1Q12889 678 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 CUL2Q13617 745 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 KLF5Q13887 457 aaPredicted RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 ELAVL3Q14576 367 aaKnown RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 FASTKD3Q14CZ7 662 aaKnown RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 TGIF1Q15583 401 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 INAQ16352 499 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 AGKQ53H12 422 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 FASTKD1Q53R41 847 aaKnown RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 TEX35Q5T0J7 233 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 SEL1L3Q68CR1 1132 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 IRGCQ6NXR0 463 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 GUSBP11Q6P575 273 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 FAM159AQ6UWV7 190 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 GCNT7Q6ZNI0 430 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 ADCK1Q86TW2 530 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 TAC4Q86UU9 113 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 KCNMB4Q86W47 210 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZFAND4Q86XD8 727 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 RNF148Q8N7C7 305 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 FBXL13Q8NEE6 735 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 OR2A12Q8NGT7 310 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 PHYHIPQ92561 330 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 AGAP4Q96P64 663 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 TNFRSF13CQ96RJ3 184 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 TCEAL2Q9H3H9 227 aaPredicted RBP4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 STARD5Q9NSY2 213 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 TXLNGQ9NUQ3 528 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 ATG4BQ9Y4P1 393 aa4.63□□□□□ -1.67
RNU4-39P-201ENST00000362455 SPTAN1Q13813 2472 aaKnown RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 A0A1B0GVL5 298 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZNF724A8MTY0 619 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 TRAFD1O14545 582 aaPredicted RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 SH2D1BO14796 132 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 ARPC1BO15143 372 aaKnown RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 SNAP91O60641 907 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 FCER2P06734 321 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 GP1BAP07359 652 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 FUT1P19526 365 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 NPY2RP49146 381 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 UCNP55089 124 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 RPS4XP62701 263 aaKnown RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 CDKL1Q00532 357 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 MYBPC1Q00872 1141 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 CDKN3Q16667 212 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 CLPPQ16740 277 aaPredicted RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 ECSCRQ19T08 205 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 DNAJC21Q5F1R6 531 aaKnown RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 LDLRAP1Q5SW96 308 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 DDI2Q5TDH0 399 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 IL23RQ5VWK5 629 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 LIPKQ5VXJ0 399 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 STEAP1BQ6NZ63 245 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 FBXL22Q6P050 247 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 UNC5DQ6UXZ4 953 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 Q6ZSR6 202 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 SYVN1Q86TM6 617 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 HORMAD1Q86X24 394 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZNF683Q8IZ20 524 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 RDH11Q8TC12 318 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 SPPL2AQ8TCT8 520 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 HTR3CQ8WXA8 447 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 PNPLA2Q96AD5 504 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 PSMB7Q99436 277 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 KLF6Q99612 283 aaPredicted RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 OPRPNQ99935 248 aaPredicted RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 FEM1AQ9BSK4 669 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 EGLN1Q9GZT9 426 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 PARLQ9H300 379 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 WDR41Q9HAD4 459 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 ACP6Q9NPH0 428 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 LHX3Q9UBR4 397 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 ASIC3Q9UHC3 531 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 SLC6A5Q9Y345 797 aa4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZNF638Q14966 1978 aaKnown RBP4.62□□□□□ -1.67
RNU4-39P-201ENST00000362455 AHCTF1Q8WYP5 2266 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 A0A0D9SEW6 157 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 SPTY2D1-AS1A0A0U1RR47 76 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms