RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ING5Q8WYH8 240 aa13.82□□□□□ -0.2
UBAP1-202ENST00000359544 EXOSC8Q96B26 276 aaKnown RBP13.82□□□□□ -0.2
UBAP1-202ENST00000359544 TM4SF18Q96CE8 201 aa13.82□□□□□ -0.2
UBAP1-202ENST00000359544 ESRP2Q9H6T0 727 aaKnown RBP13.82□□□□□ -0.2
UBAP1-202ENST00000359544 KRCC1Q9NPI7 259 aaPredicted RBP13.82□□□□□ -0.2
UBAP1-202ENST00000359544 DZANK1Q9NVP4 752 aa13.82□□□□□ -0.2
UBAP1-202ENST00000359544 C2orf16Q68DN1 1984 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 ANKRD20A5PA0PJZ0 165 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 CPSF4LA6NMK7 179 aaKnown RBP13.81□□□□□ -0.2
UBAP1-202ENST00000359544 LINC01387J3KSC0 135 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 NDUFB6O95139 128 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 SPDEFO95238 335 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 AHRP35869 848 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 GPR4P46093 362 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 ZP2Q05996 745 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 IL10RAQ13651 578 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 MLC1Q15049 377 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 LINC00303Q3SY05 128 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 HAGHLQ6PII5 290 aaPredicted RBP13.81□□□□□ -0.2
UBAP1-202ENST00000359544 OVCH1Q7RTY7 1134 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 BPIFCQ8NFQ6 507 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 GANCQ8TET4 914 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 EQTNQ9NQ60 294 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 INSL5Q9Y5Q6 135 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 SLC22A31A6NKX4 558 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 ZNF254O75437 659 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 C1orf105O95561 183 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 IFNA4P05014 189 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 CHRM4P08173 479 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 MPGP29372 298 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 ACVR1BP36896 505 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 DMKNQ6E0U4 476 aaPredicted RBP13.81□□□□□ -0.2
UBAP1-202ENST00000359544 UQCC3Q6UW78 93 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 C17orf47Q8NEP4 570 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 OR1M1Q8NGA1 313 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 SMAP2Q8WU79 429 aaPredicted RBP13.81□□□□□ -0.2
UBAP1-202ENST00000359544 ZNF764Q96H86 408 aaPredicted RBP13.81□□□□□ -0.2
UBAP1-202ENST00000359544 C4orf36Q96KX1 117 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 ARHGDIGQ99819 225 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 ZCCHC2Q9C0B9 1178 aaKnown RBP13.81□□□□□ -0.2
UBAP1-202ENST00000359544 SEMA4CQ9C0C4 833 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 B4GALT6Q9UBX8 382 aa13.81□□□□□ -0.2
UBAP1-202ENST00000359544 C2CD4DB7Z1M9 353 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 J3QLW9 94 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 PLPP1O14494 284 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 KLF4O43474 513 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 ATG12O94817 140 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 EGFP01133 1207 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 RLN2P04090 185 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 ZNF19P17023 458 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 PRAMEF8Q5VWM4 474 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 PRAMEF7Q5VXH5 474 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 HMGN2P46Q86SG4 172 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 GHSRQ92847 366 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 SAMD8Q96LT4 415 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 ORAI3Q9BRQ5 295 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 MFFQ9GZY8 342 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 ZCCHC3Q9NUD5 404 aaKnown RBP13.8□□□□□ -0.2
UBAP1-202ENST00000359544 RASL12Q9NYN1 266 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 TAS2R10Q9NYW0 307 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 EPHA6Q9UF33 1036 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 YIPF1Q9Y548 306 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 WDFY4Q6ZS81 3184 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 A0A1B0GTQ1 180 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 LRG1P02750 347 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 PVALBP20472 110 aaPredicted RBP13.8□□□□□ -0.2
UBAP1-202ENST00000359544 MPPED2Q15777 294 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 HEPHL1Q6MZM0 1159 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 NUDT18Q6ZVK8 323 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 MBOAT2Q6ZWT7 520 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 SVBPQ8N300 66 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 DNAAF1Q8NEP3 725 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 WDR89Q96FK6 387 aaPredicted RBP13.8□□□□□ -0.2
UBAP1-202ENST00000359544 NARS2Q96I59 477 aaKnown RBP13.8□□□□□ -0.2
UBAP1-202ENST00000359544 UBQLN3Q9H347 655 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 ZMIZ1Q9ULJ6 1067 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 PCDHGA5Q9Y5G8 931 aa13.8□□□□□ -0.2
UBAP1-202ENST00000359544 DISC1C4P0D8 188 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 DLL1O00548 723 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 ZNF35P13682 527 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 MGMTP16455 207 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 NT5EP21589 574 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 MST1P26927 711 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 CCR2P41597 374 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 MICBQ29980 383 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 OLIG3Q7RTU3 272 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 NRMQ8IXM6 262 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 TCEAL8Q8IYN2 117 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 LILRA3Q8N6C8 439 aaPredicted RBP13.79□□□□□ -0.2
UBAP1-202ENST00000359544 OR52L1Q8NGH7 329 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 TSNAXQ99598 290 aaKnown RBP13.79□□□□□ -0.2
UBAP1-202ENST00000359544 C5AR2Q9P296 337 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 PRKAB1Q9Y478 270 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 ZC3H12DA2A288 527 aaKnown RBP13.79□□□□□ -0.2
UBAP1-202ENST00000359544 IGF2P01344 180 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 PRG2P13727 222 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 RFC3P40938 356 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 STARP49675 285 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 PRLHRP49683 370 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 TPGS2Q68CL5 300 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms