RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 MAB21L2Q9Y586 359 aa17.18■□□□□ 0.34
SNX11-201ENST00000359238 TMEM129A0AVI4 362 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 TGFBR3LH3BV60 316 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 M0R3H8 397 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 NR2F1P10589 423 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 ZNF81P51508 661 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 LSM11P83369 360 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX11-201ENST00000359238 PUDPQ08623 228 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 TMEM64Q6YI46 380 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 ST8SIA4Q92187 359 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 OR2M2Q96R28 347 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 RDH8Q9NYR8 311 aa17.17■□□□□ 0.34
SNX11-201ENST00000359238 H3BN98 237 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 FOXS1O43638 330 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 FCMRO60667 390 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 GABRA4P48169 554 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 BTN1A1Q13410 526 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 AMZ1Q400G9 498 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 PRAMEF17Q5VTA0 474 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 LRRC25Q8N386 305 aaPredicted RBP17.16■□□□□ 0.34
SNX11-201ENST00000359238 OR4K14Q8NGD5 310 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 OR6C4Q8NGE1 309 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 NXPE2Q96DL1 559 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 SLC35A4Q96G79 324 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 OR51J1Q9H342 316 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 HCN3Q9P1Z3 774 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 KIF25Q9UIL4 384 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 A0A1B0GVI7 797 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 A0A1W2PPL8 197 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 NTN1O95631 604 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 CFIP05156 583 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 RNF144AP50876 292 aaPredicted RBP17.16■□□□□ 0.34
SNX11-201ENST00000359238 B2MP61769 119 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 CEP76Q8TAP6 659 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 WBP1Q96G27 269 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 UBL7Q96S82 380 aaPredicted RBP17.16■□□□□ 0.34
SNX11-201ENST00000359238 POLDIP3Q9BY77 421 aaKnown RBP17.16■□□□□ 0.34
SNX11-201ENST00000359238 CTPS2Q9NRF8 586 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 SEMA3GQ9NS98 782 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 P2RX2Q9UBL9 471 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 CHST2Q9Y4C5 530 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 FREM2Q5SZK8 3169 aa17.16■□□□□ 0.34
SNX11-201ENST00000359238 CENPVL1A0A0U1RR11 272 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 hCG_1807616A0A1W2PRN6 198 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 URADA6NGE7 173 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 LRRTM2O43300 516 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 EMC8O43402 210 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 FRS3O43559 492 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 PAHP00439 452 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 CPMP14384 443 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 CAMK2DQ13557 499 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 OR2G6Q5TZ20 316 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 TCTN3Q6NUS6 607 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 FBXW5Q969U6 566 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 SHARPINQ9H0F6 387 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 SOHLH2Q9NX45 425 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 TNRC6BQ9UPQ9 1833 aaKnown RBP17.15■□□□□ 0.34
SNX11-201ENST00000359238 PATE3B3GLJ2 98 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 KCNJ5P48544 419 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 ZNF273Q14593 569 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 EXOSC7Q15024 291 aaKnown RBP17.15■□□□□ 0.34
SNX11-201ENST00000359238 LPAL2Q16609 132 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 SYT14P1Q58G82 188 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 SHEQ5VZ18 495 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 OR52H1Q8NGJ2 320 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 OR2I1PQ8NGU4 316 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 GATAD2BQ8WXI9 593 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 ANKRD9Q96BM1 317 aaPredicted RBP17.15■□□□□ 0.34
SNX11-201ENST00000359238 OTULINQ96BN8 352 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 AHCYL2Q96HN2 611 aaKnown RBP17.15■□□□□ 0.34
SNX11-201ENST00000359238 POLR2J3Q9H1A7 115 aaKnown RBP17.15■□□□□ 0.34
SNX11-201ENST00000359238 SLC38A1Q9H2H9 487 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 FGF20Q9NP95 211 aaPredicted RBP17.15■□□□□ 0.34
SNX11-201ENST00000359238 MRPS18AQ9NVS2 196 aaKnown RBP17.15■□□□□ 0.34
SNX11-201ENST00000359238 TVP23BQ9NYZ1 205 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 GPR55Q9Y2T6 319 aaPredicted RBP17.15■□□□□ 0.34
SNX11-201ENST00000359238 FER1L5A0AVI2 2057 aa17.15■□□□□ 0.34
SNX11-201ENST00000359238 TLX2O43763 284 aaPredicted RBP17.14■□□□□ 0.33
SNX11-201ENST00000359238 PRKYO43930 277 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 NCR1O76036 304 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 CFDP00746 253 aaPredicted RBP17.14■□□□□ 0.33
SNX11-201ENST00000359238 ACSM4P0C7M7 580 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 CXCL3P19876 107 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 EPHA8P29322 1005 aaPredicted RBP17.14■□□□□ 0.33
SNX11-201ENST00000359238 SSTR2P30874 369 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 BTCP35070 178 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 KHKP50053 298 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 PDX1P52945 283 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 GAS1P54826 345 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 SEC23BQ15437 767 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 PRTGQ2VWP7 1150 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 HSD17B12Q53GQ0 312 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 USP53Q70EK8 1073 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 LINC00518Q8N0U6 118 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 MS4A15Q8N5U1 240 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 DTWD2Q8NBA8 298 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 SFXN5Q8TD22 340 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 SLC9A6Q92581 669 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 CDS1Q92903 461 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 RFT1Q96AA3 541 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms