RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 DNAJC5GQ8N7S2 189 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 DMBX1Q8NFW5 382 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 GON7Q9BXV9 100 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 IL23AQ9NPF7 189 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 NPIPB15A6NHN6 443 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-201ENST00000355497 A6NIN4 97 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 CACNG3O60359 315 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 FBXO24O75426 580 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 OR1Q1Q15612 314 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 NDUFAF7Q7L592 441 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 OR7D2Q96RA2 312 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 ELOVL3Q9HB03 270 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 SLC6A20Q9NP91 592 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 RCE1Q9Y256 329 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 GABRR3A8MPY1 467 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 GABRPO00591 440 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 HOXD12P35452 270 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 CATR1Q13166 79 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 ESCO2Q56NI9 601 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 FAM57BQ71RH2 274 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 ANKRD9Q96BM1 317 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-201ENST00000355497 NKX3-1Q99801 234 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF281Q9Y2X9 895 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 PTRH2Q9Y3E5 179 aaKnown RBP13.93□□□□□ -0.18
LMX1B-201ENST00000355497 A6NL46 340 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 SLC2A1P11166 492 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 AHRP35869 848 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 AADACL3Q5VUY0 350 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 PM20D1Q6GTS8 502 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 TANGO2Q6ICL3 276 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 RBMS3Q6XE24 437 aaKnown RBP13.93□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF765Q7L2R6 523 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 TP53INP2Q8IXH6 220 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 FAM109AQ8N4B1 249 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 OR8J2Q8NGG1 315 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 CPNE4Q96A23 557 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-201ENST00000355497 C1orf123Q9NWV4 160 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 OR14J1Q9UGF5 321 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 NCR1O76036 304 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 TNFSF8P32971 234 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 F2RL1P55085 397 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 HOXC5Q00444 222 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 EEF1A2Q05639 463 aaKnown RBP13.93□□□□□ -0.18
LMX1B-201ENST00000355497 TATDN3Q17R31 274 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 YIF1BQ5BJH7 314 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 RPL22L1Q6P5R6 122 aaKnown RBP13.93□□□□□ -0.18
LMX1B-201ENST00000355497 GGHQ92820 318 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 FOXN4Q96NZ1 517 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 OCSTAMPQ9BR26 566 aa13.93□□□□□ -0.18
LMX1B-201ENST00000355497 H0Y8G0 127 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF92Q03936 586 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 TLE4Q04727 773 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 DPPA4Q7L190 304 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 GTF2H4Q92759 462 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 ARPC5LQ9BPX5 153 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 ANKRD19PQ9H560 264 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 DYNLRB1Q9NP97 96 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 VAPAQ9P0L0 249 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 FZD9O00144 591 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 IMPA2O14732 288 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 FABP6P51161 128 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 SLX4IPQ5VYV7 408 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 LYPD4Q6UWN0 246 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 VRK2Q86Y07 508 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 CLEC1AQ8NC01 280 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF597Q96LX8 424 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 PAAF1Q9BRP4 392 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 ACPTQ9BZG2 426 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 IL26Q9NPH9 171 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 TRBV11-1A0A0K0K1C0 115 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 POM121CA8CG34 1229 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 PRAMEF26H0Y7S4 382 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 ARNTLO00327 626 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 IQCF3P0C7M6 154 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 MRPS34P82930 218 aaKnown RBP13.92□□□□□ -0.18
LMX1B-201ENST00000355497 ARL16Q0P5N6 197 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 MBTPS1Q14703 1052 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 EXOSC7Q15024 291 aaKnown RBP13.92□□□□□ -0.18
LMX1B-201ENST00000355497 SIX1Q15475 284 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-201ENST00000355497 BCL7AQ4VC05 210 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 RANBP10Q6VN20 620 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 FCRL1Q96LA6 429 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 IL37Q9NZH6 218 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 SRPK3Q9UPE1 567 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 TNFRSF10AO00220 468 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF623O75123 536 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 BCKDHBP21953 392 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 RUNX2Q13950 521 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 RBMS2Q15434 407 aaKnown RBP13.92□□□□□ -0.18
LMX1B-201ENST00000355497 KCNJ8Q15842 424 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 DEFB133Q30KQ1 61 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 CCDC71Q8IV32 467 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-201ENST00000355497 SLC43A2Q8N370 569 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 FBXO27Q8NI29 283 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 FAM3CQ92520 227 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 FAM212BQ9NTI7 297 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-201ENST00000355497 ZDHHC7Q9NXF8 308 aa13.92□□□□□ -0.18
LMX1B-201ENST00000355497 RAB19A4D1S5 217 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 FAM155AB1AL88 458 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms