RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CDK10Q15131 360 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 STK11Q15831 433 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 NRF1Q16656 503 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 SMU1Q2TAY7 513 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 CCNYL2Q5T2Q4 361 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 STEAP4Q687X5 459 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 FAM180BQ6P0A1 224 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 C12orf54Q6X4T0 127 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 PLEKHG7Q6ZR37 379 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 CARM1Q86X55 608 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 SNX32Q86XE0 403 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 OR2M3Q8NG83 312 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 C11orf24Q96F05 449 aaPredicted RBP9.98□□□□□ -0.81
RTN3-204ENST00000354497 SLC35A4Q96G79 324 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 GMPPAQ96IJ6 420 aaPredicted RBP9.98□□□□□ -0.81
RTN3-204ENST00000354497 C12orf65Q9H3J6 166 aaKnown RBP9.98□□□□□ -0.81
RTN3-204ENST00000354497 MRGBPQ9NV56 204 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 NSMCE4AQ9NXX6 385 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 CISD1Q9NZ45 108 aaKnown RBP9.98□□□□□ -0.81
RTN3-204ENST00000354497 EMC3Q9P0I2 261 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 TXNDC16Q9P2K2 825 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 ATP6V1HQ9UI12 483 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 KCNS2Q9ULS6 477 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 B3GALT5Q9Y2C3 310 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 TRAF6Q9Y4K3 522 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 SNX8Q9Y5X2 465 aa9.98□□□□□ -0.81
RTN3-204ENST00000354497 A0A096LNT2 108 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 TO15178 435 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 KCNAB3O43448 404 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 TSPAN2O60636 221 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 SS18L1O75177 396 aaPredicted RBP9.97□□□□□ -0.81
RTN3-204ENST00000354497 CD8AP01732 235 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 IGHV4-31P0DP07 118 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 STMN1P16949 149 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 CSNK2A2P19784 350 aaPredicted RBP9.97□□□□□ -0.81
RTN3-204ENST00000354497 HNF1AP20823 631 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 IGFBP5P24593 272 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 ALDH9A1P49189 494 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 EMDP50402 254 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 CDH11P55287 796 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 TPTEP56180 551 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 C21orf58P58505 322 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 DSCR9P59020 149 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 DUSP2Q05923 314 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 CCNIQ14094 377 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 LIPJQ5W064 366 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 FIGNL1Q6PIW4 674 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.97□□□□□ -0.81
RTN3-204ENST00000354497 FADS6Q8N9I5 356 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 OR52B6Q8NGF0 335 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 STAG3L4Q8TBR4 150 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 CAPSLQ8WWF8 208 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 PMM1Q92871 262 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 SLC29A1Q99808 456 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 CACNG6Q9BXT2 260 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 OR10A4Q9H209 315 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 PTGES2Q9H7Z7 377 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 ANKRA2Q9H9E1 313 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 XPR1Q9UBH6 696 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 MCTS1Q9ULC4 181 aaKnown RBP9.97□□□□□ -0.81
RTN3-204ENST00000354497 GPR55Q9Y2T6 319 aaPredicted RBP9.97□□□□□ -0.81
RTN3-204ENST00000354497 OR10H1Q9Y4A9 318 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 TEX264Q9Y6I9 313 aa9.97□□□□□ -0.81
RTN3-204ENST00000354497 TRPC5OSA6NMA1 111 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 H3BMQ9 156 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 LINC01387J3KSC0 135 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 hCG_2039718K7EN88 272 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 KIAA0513O60268 411 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 WISP3O95389 354 aaPredicted RBP9.96□□□□□ -0.82
RTN3-204ENST00000354497 NTN1O95631 604 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 OPN1LWP04000 364 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 ATP1B1P05026 303 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 PGRP06401 933 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 ATP6V1B1P15313 513 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 CREB1P16220 341 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 SLC25A16P16260 332 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 PSMB1P20618 241 aaKnown RBP9.96□□□□□ -0.82
RTN3-204ENST00000354497 PSMA4P25789 261 aaKnown RBP9.96□□□□□ -0.82
RTN3-204ENST00000354497 EVI2BP34910 448 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 OR3A3P47888 321 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 MAPK12P53778 367 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 GAS1P54826 345 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 ARL4CP56559 192 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 MRPS22P82650 360 aaKnown RBP9.96□□□□□ -0.82
RTN3-204ENST00000354497 IRF9Q00978 393 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 SCRN3Q0VDG4 424 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 NAB1Q13506 487 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 GANABQ14697 944 aaKnown RBP9.96□□□□□ -0.82
RTN3-204ENST00000354497 ACAP2Q15057 778 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 TAB1Q15750 504 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 FAM120AOSQ5T036 256 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 AGAP6Q5VW22 663 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 FAM205BPQ63HN1 556 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 LPCAT4Q643R3 524 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 FAM166AQ6J272 317 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 SLC48A1Q6P1K1 146 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 SPATC1Q76KD6 591 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 PAGE2Q7Z2X7 111 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 SLC44A2Q8IWA5 706 aaPredicted RBP9.96□□□□□ -0.82
RTN3-204ENST00000354497 LINC00518Q8N0U6 118 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms