RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MMP3P08254 477 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 CXADRP78310 365 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 FZD5Q13467 585 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 TEAD2Q15562 447 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 OR7A5Q15622 319 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 NDUFAF6Q330K2 333 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 FAM111BQ6SJ93 734 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 ARL9Q6T311 187 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 GDPD4Q6W3E5 623 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 NPSR1Q6W5P4 371 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 CEACAM19Q7Z692 300 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 PPTC7Q8NI37 304 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 LINC01599Q8WXQ3 324 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 MED8Q96G25 268 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 TBX5Q99593 518 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 GPA33Q99795 319 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 MED10Q9BTT4 135 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 KLK14Q9P0G3 267 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 CAMK2AQ9UQM7 478 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 GBF1Q92538 1859 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 FOXE1O00358 373 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-203ENST00000349748 BCL2L11O43521 198 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 MOSPD3O75425 235 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 TXNDC12O95881 172 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 CH25HO95992 272 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 HOXB5P09067 269 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 NPSP0C0P6 89 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 GAAP10253 952 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 HOXA5P20719 270 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 PRPS1L1P21108 318 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 GNALP38405 381 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 NDUFA6P56556 154 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 ELFN2Q5R3F8 820 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF813Q6ZN06 617 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 PAQR9Q6ZVX9 377 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 OR1J4Q8NGS1 313 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 FGF11Q92914 225 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 WFDC6Q9BQY6 131 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 SLITRK2Q9H156 845 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 EGLN3Q9H6Z9 239 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 SFXN1Q9H9B4 322 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 MBD1Q9UIS9 605 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-203ENST00000349748 ARRDC5A6NEK1 342 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 GPR182O15218 404 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 GSTZ1O43708 216 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-203ENST00000349748 RAB3DO95716 219 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 IL5P05113 134 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 EPHX1P07099 455 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 SNRNP70P08621 437 aaKnown RBP9.87□□□□□ -0.83
CAPN3-203ENST00000349748 ATP6V1E1P36543 226 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 LHX1P48742 406 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 MRPS10P82664 201 aaKnown RBP9.87□□□□□ -0.83
CAPN3-203ENST00000349748 CLEC12AQ5QGZ9 265 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 MARC1Q5VT66 337 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 OR10K2Q6IF99 312 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 CXCL17Q6UXB2 119 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 KCNRGQ8N5I3 272 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 OR5AK3PQ8NH89 298 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 PPP1R16AQ96I34 528 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 IP6K3Q96PC2 410 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 C20orf24Q9BUV8 137 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 HRH4Q9H3N8 390 aa9.87□□□□□ -0.83
CAPN3-203ENST00000349748 FAM124BQ9H5Z6 455 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-203ENST00000349748 A0A0D9SG52 128 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 TRAPPC13A5PLN9 417 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 C9JQL5 133 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 AGPAT2O15120 278 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 CHST10O43529 356 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SMAD6O43541 496 aaKnown RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 IFNA10P01566 189 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ARG1P05089 322 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 AKR1A1P14550 325 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 RAB4AP20338 218 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 CDX1P47902 265 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 DGKGP49619 791 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SRSF11Q05519 484 aaKnown RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 FOXO1Q12778 655 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 DDX39BQ13838 428 aaKnown RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 KIAA0141Q14154 515 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 MPPED2Q15777 294 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SLC35D3Q5M8T2 416 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF385CQ66K41 422 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF322Q6U7Q0 402 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ETFBKMTQ8IXQ9 262 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 OR13C5Q8NGS8 318 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SLC7A13Q8TCU3 470 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 GPR148Q8TDV2 347 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SLC25A38Q96DW6 304 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 ZNF649Q9BS31 505 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 C16orf70Q9BSU1 422 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SMG9Q9H0W8 520 aaKnown RBP9.86□□□□□ -0.83
CAPN3-203ENST00000349748 SEC61A2Q9H9S3 476 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 IL21RQ9HBE5 538 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 BPIFA1Q9NP55 256 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 TMEM30AQ9NV96 361 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 PARPBPQ9NWS1 579 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 PCDHB1Q9Y5F3 818 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 CPED1A4D0V7 1026 aa9.86□□□□□ -0.83
CAPN3-203ENST00000349748 NDUFB6O95139 128 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms