RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 ITCHQ96J02 903 aa11.79□□□□□ -0.52
CLCC1-202ENST00000348264 ATP6V1G3Q96LB4 118 aa11.79□□□□□ -0.52
CLCC1-202ENST00000348264 OR10A4Q9H209 315 aa11.79□□□□□ -0.52
CLCC1-202ENST00000348264 RMND5AQ9H871 391 aa11.79□□□□□ -0.52
CLCC1-202ENST00000348264 MTHFD2LQ9H903 347 aaPredicted RBP11.79□□□□□ -0.52
CLCC1-202ENST00000348264 TPT1P8Q9HAU6 139 aa11.79□□□□□ -0.52
CLCC1-202ENST00000348264 P2RX2Q9UBL9 471 aa11.79□□□□□ -0.52
CLCC1-202ENST00000348264 PRSS50Q9UI38 385 aa11.79□□□□□ -0.52
CLCC1-202ENST00000348264 SPIN1Q9Y657 262 aaPredicted RBP11.79□□□□□ -0.52
CLCC1-202ENST00000348264 ZANQ9Y493 2812 aa11.79□□□□□ -0.52
CLCC1-202ENST00000348264 CSPG4Q6UVK1 2322 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 TMED7-TICAM2A0A0A6YYA0 188 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 FAM234BA2RU67 622 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 ZNF724A8MTY0 619 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 PMS2P2O95744 297 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 PLAUP00749 431 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 ADAP00813 363 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 DBIP07108 87 aaKnown RBP11.78□□□□□ -0.52
CLCC1-202ENST00000348264 IL7RP16871 459 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 HOXB9P17482 250 aaPredicted RBP11.78□□□□□ -0.52
CLCC1-202ENST00000348264 CCNA2P20248 432 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 IL32P24001 234 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 MAGEA8P43361 318 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 DSTNP60981 165 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 EPS8Q12929 822 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 SFRP5Q5T4F7 317 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 ALKBH2Q6NS38 261 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 SLC2A7Q6PXP3 512 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 SEZ6L2Q6UXD5 910 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 ZNF836Q6ZNA1 936 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 ZNF704Q6ZNC4 412 aaPredicted RBP11.78□□□□□ -0.52
CLCC1-202ENST00000348264 VRK2Q86Y07 508 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 STEAP2Q8NFT2 490 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 LRRC8CQ8TDW0 803 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 SLC38A5Q8WUX1 472 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 GTF2H4Q92759 462 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 PLPPR2Q96GM1 343 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 CCL19Q99731 98 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 EBF4Q9BQW3 602 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 PAIP1Q9H074 479 aaKnown RBP11.78□□□□□ -0.52
CLCC1-202ENST00000348264 TCF7L2Q9NQB0 619 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 RLIMQ9NVW2 624 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 OSGIN1Q9UJX0 560 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 TMED7Q9Y3B3 224 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 HDGFL3Q9Y3E1 203 aa11.78□□□□□ -0.52
CLCC1-202ENST00000348264 IGKV3D-15A0A087WSY6 115 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 TMEM72A0PK05 275 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 CDHR4A6H8M9 788 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 CFAP73A6NFT4 308 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 ZNF716A6NP11 495 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 FAAHO00519 579 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 POLR3GO15318 223 aaPredicted RBP11.77□□□□□ -0.53
CLCC1-202ENST00000348264 RAMP1O60894 148 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 NUDT7P0C024 238 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 TFPTP0C1Z6 253 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 GKN3PP0CG01 181 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 TACR3P29371 465 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 HTR3AP46098 478 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 MRPL19P49406 292 aaKnown RBP11.77□□□□□ -0.53
CLCC1-202ENST00000348264 IDH3AP50213 366 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 POLR2HP52434 150 aaKnown RBP11.77□□□□□ -0.53
CLCC1-202ENST00000348264 CRISP3P54108 245 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 NR1H2P55055 460 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 NKX6-1P78426 367 aaPredicted RBP11.77□□□□□ -0.53
CLCC1-202ENST00000348264 ITGADQ13349 1161 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 GNA13Q14344 377 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 P2RY6Q15077 328 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 TAB1Q15750 504 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 LIN52Q52LA3 116 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 Q5PR19 223 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 C20orf204Q6ZNR8 217 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 Q6ZT83 130 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 GALNT5Q7Z7M9 940 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 ATG4DQ86TL0 474 aaPredicted RBP11.77□□□□□ -0.53
CLCC1-202ENST00000348264 MTDHQ86UE4 582 aaKnown RBP11.77□□□□□ -0.53
CLCC1-202ENST00000348264 PEX5LQ8IYB4 626 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 OR52P1PQ8NH57 321 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 PMM1Q92871 262 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 KISS1RQ969F8 398 aaPredicted RBP11.77□□□□□ -0.53
CLCC1-202ENST00000348264 PIGTQ969N2 578 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 TMEM19Q96HH6 336 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 PIP5K1AQ99755 562 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 TMEM204Q9BSN7 226 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 HDHD5Q9BXW7 423 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 ZNF443Q9Y2A4 671 aaPredicted RBP11.77□□□□□ -0.53
CLCC1-202ENST00000348264 PCDHB14Q9Y5E9 798 aa11.77□□□□□ -0.53
CLCC1-202ENST00000348264 ZC3H12DA2A288 527 aaKnown RBP11.76□□□□□ -0.53
CLCC1-202ENST00000348264 DNPH1O43598 174 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 SMPD2O60906 423 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 LYZL6O75951 148 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 TGDSO95455 350 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 IMPDH2P12268 514 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 COX5AP20674 150 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 FPR1P21462 350 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 SLC1A3P43003 542 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 CLK1P49759 484 aaKnown RBP11.76□□□□□ -0.53
CLCC1-202ENST00000348264 STX1BP61266 288 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 PDK3Q15120 406 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 RNF220Q5VTB9 566 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 BHLHA15Q7RTS1 189 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms